RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 EEF1E1-BLOC1S5C9J1V9 151 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 ADAMDEC1O15204 470 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 EEF1E1O43324 174 aaKnown RBP21.24■□□□□ 0.99
VARS-217ENST00000440048 DNAJA2O60884 412 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 BCAS1O75363 584 aaPredicted RBP21.24■□□□□ 0.99
VARS-217ENST00000440048 NTN1O95631 604 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 CD1EP15812 388 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 HOXB9P17482 250 aaPredicted RBP21.24■□□□□ 0.99
VARS-217ENST00000440048 NCF2P19878 526 aaPredicted RBP21.24■□□□□ 0.99
VARS-217ENST00000440048 CAPN3P20807 821 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 ELK4P28324 431 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 UQCRC1P31930 480 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 SGCBQ16585 318 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 SLC25A53Q5H9E4 307 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 OR2A2Q6IF42 318 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 LILRA2Q8N149 483 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 ARFGAP2Q8N6H7 521 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 OR10D3Q8NH80 312 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 RNASE6Q93091 150 aaKnown RBP21.24■□□□□ 0.99
VARS-217ENST00000440048 MRGPRX4Q96LA9 322 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 SIKE1Q9BRV8 207 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 MTHFD2LQ9H903 347 aaPredicted RBP21.24■□□□□ 0.99
VARS-217ENST00000440048 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.24■□□□□ 0.99
VARS-217ENST00000440048 P2RX2Q9UBL9 471 aa21.24■□□□□ 0.99
VARS-217ENST00000440048 A0A0G2JND7 137 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 A0A0J9YW62 118 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 A0A1W2PNV4 684 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 AGAP5A6NIR3 686 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 CLDN24A6NM45 220 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 ETV2O00321 342 aaPredicted RBP21.23■□□□□ 0.99
VARS-217ENST00000440048 TNFSF11O14788 317 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 TNFSF13O75888 250 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 SHC1P29353 583 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 SSTR2P30874 369 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 DSTNP60981 165 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 KCNJ10P78508 379 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 HSP90B2PQ58FF3 399 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 ESPNLQ6ZVH7 1005 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 OR2V1Q8NHB1 315 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 LRRC46Q96FV0 321 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 KLHL15Q96M94 604 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 ZNF385DQ9H6B1 395 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 RNF122Q9H9V4 155 aa21.23■□□□□ 0.99
VARS-217ENST00000440048 ANKRD17O75179 2603 aaKnown RBP21.23■□□□□ 0.99
VARS-217ENST00000440048 POLQO75417 2590 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 CLIC1O00299 241 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 CXCL13O43927 109 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 CRHP06850 196 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 RPS4Y1P22090 263 aaKnown RBP21.22■□□□□ 0.99
VARS-217ENST00000440048 SFTPDP35247 375 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 SLC6A8P48029 635 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 EEF1A1P68104 462 aaKnown RBP21.22■□□□□ 0.99
VARS-217ENST00000440048 PLAURQ03405 335 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 SNTB1Q13884 538 aaKnown RBP21.22■□□□□ 0.99
VARS-217ENST00000440048 PAGE3Q5JUK9 113 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 LRIF1Q5T3J3 769 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 EEF1A1P5Q5VTE0 462 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 LURAP1LQ8IV03 231 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 PMM1Q92871 262 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 C14orf79Q96F83 325 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 RABEP2Q9H5N1 569 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 PAQR5Q9NXK6 330 aaPredicted RBP21.22■□□□□ 0.99
VARS-217ENST00000440048 SLC25A37Q9NYZ2 338 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 SLAMF8Q9P0V8 285 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 TRIM33Q9UPN9 1127 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 PDZD2O15018 2839 aa21.22■□□□□ 0.99
VARS-217ENST00000440048 AQP8O94778 261 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 TFPTP0C1Z6 253 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 PGCP20142 388 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 SESN3P58005 492 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 RGNQ15493 299 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 PDSS1Q5T2R2 415 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 HBMQ6B0K9 141 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 PPP4R4Q6NUP7 873 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 MSRB3Q8IXL7 192 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 SLC38A5Q8WUX1 472 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 ST8SIA1Q92185 356 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 PIGMQ9H3S5 423 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 MED4Q9NPJ6 270 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 CALML5Q9NZT1 146 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 FOXD3Q9UJU5 478 aaPredicted RBP21.21■□□□□ 0.99
VARS-217ENST00000440048 CCDC168Q8NDH2 2452 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 CSMD1Q96PZ7 3565 aa21.21■□□□□ 0.99
VARS-217ENST00000440048 MPDZO75970 2070 aa21.2■□□□□ 0.99
VARS-217ENST00000440048 A0A1W2PP18 115 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 BCHEP06276 602 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 FCGR2AP12318 317 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 KIR2DL2P43627 348 aaPredicted RBP21.2■□□□□ 0.98
VARS-217ENST00000440048 VWA1Q6PCB0 445 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 LUZP2Q86TE4 346 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 CMIPQ8IY22 773 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 CNEP1R1Q8N9A8 125 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 ATP6V1C2Q8NEY4 427 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 WDR60Q8WVS4 1066 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 CNOT9Q92600 299 aaKnown RBP21.2■□□□□ 0.98
VARS-217ENST00000440048 OSTF1Q92882 214 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 STARD4Q96DR4 205 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 TMEM120AQ9BXJ8 343 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 PRRG4Q9BZD6 226 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms