RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ATP8B1O43520 1251 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 CXCL13O43927 109 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 TROVE2P10155 538 aaKnown RBP eCLIP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 PRKCAP17252 672 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 PSMA4P25789 261 aaKnown RBP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 SLC7A1P30825 629 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 PGM1P36871 562 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 TPD52P55327 224 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 CTBP2P56545 445 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 SORDQ00796 357 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 FOXF1Q12946 379 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 FOXF2Q12947 444 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 FADDQ13158 208 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 SYPL1Q16563 259 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 TMEM176BQ3YBM2 270 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 AGKQ53H12 422 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 SLC25A53Q5H9E4 307 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 METTL21CQ5VZV1 264 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 POMZP3Q6PJE2 187 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 SLC2A7Q6PXP3 512 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 BLOC1S3Q6QNY0 202 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 DNAJC14Q6Y2X3 702 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 FRRS1Q6ZNA5 592 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 LUZP2Q86TE4 346 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 GGNQ86UU5 652 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 ANKFN1Q8N957 763 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 ATP6V1C2Q8NEY4 427 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 OR10D3Q8NH80 312 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 FNDC9Q8TBE3 224 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 FAM222BQ8WU58 562 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 WDR60Q8WVS4 1066 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 GTF2H4Q92759 462 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 CPNE4Q96A23 557 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF845Q96IR2 970 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 SLC39A3Q9BRY0 314 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 TRIM8Q9BZR9 551 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 RNF122Q9H9V4 155 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 EXOSC3Q9NQT5 275 aaKnown RBP9.41□□□□□ -0.9
MCF2L-216ENST00000439475 JKAMPQ9P055 326 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 NDRG3Q9UGV2 375 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 KCNE5Q9UJ90 142 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 EMC9Q9Y3B6 208 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 L3MBTL1Q9Y468 752 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 FLNCQ14315 2725 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 HEATR5AQ86XA9 2040 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 ASH1LQ9NR48 2969 aaKnown RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 A0A096LPI6 279 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 A0A0G2JND7 137 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 A0A0G2JPF8 293 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 A0A0J9YW62 118 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 A0A1W2PNV4 684 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 A0A1W2PP18 115 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 TUBAL3A6NHL2 446 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 AGAP5A6NIR3 686 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 HNRNPCL2B2RXH8 293 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 HNRNPCL3B7ZW38 293 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 C5orf58C9J3I9 102 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 NR5A2O00482 541 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 TNFSF11O14788 317 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 CASKO14936 926 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 OIP5O43482 229 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 HNRNPCL1O60812 293 aaKnown RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 SMNDC1O75940 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 OPN1LWP04000 364 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 HNRNPCL4P0DMR1 293 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 ETFAP13804 333 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 PRF1P14222 555 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 RYKP34925 604 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 SFTPDP35247 375 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 APOBEC1P41238 236 aaKnown RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 HTR3AP46098 478 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 RNF144AP50876 292 aaPredicted RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 DLX5P56178 289 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 SESN3P58005 492 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 SIRPAP78324 504 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 LARS2Q15031 903 aaKnown RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 TOMM34Q15785 309 aaPredicted RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 MAPK14Q16539 360 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 NDUFAF6Q330K2 333 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 COX20Q5RI15 118 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 C3orf33Q6P1S2 294 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 PLXDC2Q6UX71 529 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 FAM214BQ7L5A3 538 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 OLIG3Q7RTU3 272 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 GRINAQ7Z429 371 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF440Q8IYI8 595 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 TSPEARQ8WU66 669 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 SLC25A43Q8WUT9 341 aaPredicted RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 THOC1Q96FV9 657 aaKnown RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 GMPPAQ96IJ6 420 aaPredicted RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 ADGRG7Q96K78 797 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 SLC38A1Q9H2H9 487 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 TMEM185BQ9H7F4 350 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 NPHS2Q9NP85 383 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 MED4Q9NPJ6 270 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 ACER3Q9NUN7 267 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms