RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ZBED8Q8IZ13 594 aa2.56□□□□□ -2
VPS41-207ENST00000439468 GPD1LQ8N335 351 aa2.56□□□□□ -2
VPS41-207ENST00000439468 GPR137CQ8N3F9 429 aa2.56□□□□□ -2
VPS41-207ENST00000439468 C11orf42Q8N5U0 333 aa2.56□□□□□ -2
VPS41-207ENST00000439468 GMCL1P1Q8NEA9 526 aa2.56□□□□□ -2
VPS41-207ENST00000439468 RAET1EQ8TD07 263 aa2.56□□□□□ -2
VPS41-207ENST00000439468 CTNNBL1Q8WYA6 563 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 MYLPFQ96A32 169 aa2.56□□□□□ -2
VPS41-207ENST00000439468 CELF6Q96J87 481 aaKnown RBP2.56□□□□□ -2
VPS41-207ENST00000439468 VPS39Q96JC1 886 aa2.56□□□□□ -2
VPS41-207ENST00000439468 SERAC1Q96JX3 654 aa2.56□□□□□ -2
VPS41-207ENST00000439468 C12orf66Q96MD2 445 aa2.56□□□□□ -2
VPS41-207ENST00000439468 OR5B2Q96R09 309 aa2.56□□□□□ -2
VPS41-207ENST00000439468 ALG12Q9BV10 488 aa2.56□□□□□ -2
VPS41-207ENST00000439468 TEX13BQ9BXU2 312 aa2.56□□□□□ -2
VPS41-207ENST00000439468 SLITRK2Q9H156 845 aa2.56□□□□□ -2
VPS41-207ENST00000439468 GLIPR2Q9H4G4 154 aa2.56□□□□□ -2
VPS41-207ENST00000439468 RMND5AQ9H871 391 aa2.56□□□□□ -2
VPS41-207ENST00000439468 POLD4Q9HCU8 107 aa2.56□□□□□ -2
VPS41-207ENST00000439468 PLSCR3Q9NRY6 295 aa2.56□□□□□ -2
VPS41-207ENST00000439468 TNFRSF19Q9NS68 423 aa2.56□□□□□ -2
VPS41-207ENST00000439468 FARSBQ9NSD9 589 aaKnown RBP2.56□□□□□ -2
VPS41-207ENST00000439468 DPM3Q9P2X0 92 aa2.56□□□□□ -2
VPS41-207ENST00000439468 GALPQ9UBC7 116 aa2.56□□□□□ -2
VPS41-207ENST00000439468 LCMT1Q9UIC8 334 aa2.56□□□□□ -2
VPS41-207ENST00000439468 ANGPTL2Q9UKU9 493 aa2.56□□□□□ -2
VPS41-207ENST00000439468 SNX6Q9UNH7 406 aa2.56□□□□□ -2
VPS41-207ENST00000439468 PDE10AQ9Y233 779 aa2.56□□□□□ -2
VPS41-207ENST00000439468 SPACA6W5XKT8 324 aa2.56□□□□□ -2
VPS41-207ENST00000439468 FHAD1B1AJZ9 1412 aa2.56□□□□□ -2
VPS41-207ENST00000439468 RAPGEF2Q9Y4G8 1499 aa2.56□□□□□ -2
VPS41-207ENST00000439468 CEP170BQ9Y4F5 1589 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 RAI1Q7Z5J4 1906 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 LOC100131303A0A0U1RQF7 123 aa2.55□□□□□ -2
VPS41-207ENST00000439468 A0A1W2PNU3 283 aaPredicted RBP2.55□□□□□ -2
VPS41-207ENST00000439468 K7ENP7 123 aa2.55□□□□□ -2
VPS41-207ENST00000439468 AGRNO00468 2067 aa2.55□□□□□ -2
VPS41-207ENST00000439468 IDH1O75874 414 aaKnown RBP2.55□□□□□ -2
VPS41-207ENST00000439468 H2AFZP0C0S5 128 aa2.55□□□□□ -2
VPS41-207ENST00000439468 OR8U8P0C7N1 319 aa2.55□□□□□ -2
VPS41-207ENST00000439468 P0C879 139 aa2.55□□□□□ -2
VPS41-207ENST00000439468 VDAC1P21796 283 aa2.55□□□□□ -2
VPS41-207ENST00000439468 PCMT1P22061 227 aa2.55□□□□□ -2
VPS41-207ENST00000439468 RPL29P47914 159 aaKnown RBP2.55□□□□□ -2
VPS41-207ENST00000439468 ARFIP1P53367 373 aa2.55□□□□□ -2
VPS41-207ENST00000439468 RPL32P62910 135 aaKnown RBP2.55□□□□□ -2
VPS41-207ENST00000439468 NDPQ00604 133 aa2.55□□□□□ -2
VPS41-207ENST00000439468 BCL2L1Q07817 233 aa2.55□□□□□ -2
VPS41-207ENST00000439468 CDK13Q14004 1512 aaKnown RBP2.55□□□□□ -2
VPS41-207ENST00000439468 NWD1Q149M9 1564 aa2.55□□□□□ -2
VPS41-207ENST00000439468 ANKDD1AQ495B1 522 aa2.55□□□□□ -2
VPS41-207ENST00000439468 C10orf120Q5SQS8 335 aa2.55□□□□□ -2
VPS41-207ENST00000439468 C9orf129Q5T035 196 aaKnown RBP2.55□□□□□ -2
VPS41-207ENST00000439468 ATF7IP2Q5U623 682 aa2.55□□□□□ -2
VPS41-207ENST00000439468 TNS2Q63HR2 1409 aa2.55□□□□□ -2
VPS41-207ENST00000439468 FAM199XQ6PEV8 388 aaPredicted RBP2.55□□□□□ -2
VPS41-207ENST00000439468 CXCL17Q6UXB2 119 aa2.55□□□□□ -2
VPS41-207ENST00000439468 APTXQ7Z2E3 356 aaKnown RBP2.55□□□□□ -2
VPS41-207ENST00000439468 TRPM8Q7Z2W7 1104 aa2.55□□□□□ -2
VPS41-207ENST00000439468 ZFYVE16Q7Z3T8 1539 aa2.55□□□□□ -2
VPS41-207ENST00000439468 OR13F1Q8NGS4 319 aa2.55□□□□□ -2
VPS41-207ENST00000439468 SPRYD4Q8WW59 207 aaPredicted RBP2.55□□□□□ -2
VPS41-207ENST00000439468 FAM3CQ92520 227 aa2.55□□□□□ -2
VPS41-207ENST00000439468 ZNF414Q96IQ9 312 aa2.55□□□□□ -2
VPS41-207ENST00000439468 MS4A14Q96JA4 679 aa2.55□□□□□ -2
VPS41-207ENST00000439468 SLC30A2Q9BRI3 323 aa2.55□□□□□ -2
VPS41-207ENST00000439468 PAXXQ9BUH6 204 aa2.55□□□□□ -2
VPS41-207ENST00000439468 EDEM2Q9BV94 578 aa2.55□□□□□ -2
VPS41-207ENST00000439468 SHANK3Q9BYB0 1731 aa2.55□□□□□ -2
VPS41-207ENST00000439468 CHIAQ9BZP6 476 aa2.55□□□□□ -2
VPS41-207ENST00000439468 SIGLEC8Q9NYZ4 499 aa2.55□□□□□ -2
VPS41-207ENST00000439468 SENP1Q9P0U3 644 aa2.55□□□□□ -2
VPS41-207ENST00000439468 ADAMTS9Q9P2N4 1935 aa2.55□□□□□ -2
VPS41-207ENST00000439468 SAMD4AQ9UPU9 718 aaKnown RBP2.55□□□□□ -2
VPS41-207ENST00000439468 OR10H1Q9Y4A9 318 aa2.55□□□□□ -2
VPS41-207ENST00000439468 OARD1Q9Y530 152 aa2.55□□□□□ -2
VPS41-207ENST00000439468 MROH2AA6NES4 1674 aa2.54□□□□□ -2
VPS41-207ENST00000439468 EFCAB5A4FU69 1503 aa2.54□□□□□ -2
VPS41-207ENST00000439468 FRMPD4Q14CM0 1322 aa2.54□□□□□ -2
VPS41-207ENST00000439468 GSAPA4D1B5 854 aa2.54□□□□□ -2
VPS41-207ENST00000439468 VSTM2BA6NLU5 285 aa2.54□□□□□ -2
VPS41-207ENST00000439468 ZNF705EA8MWA4 302 aaPredicted RBP2.54□□□□□ -2
VPS41-207ENST00000439468 G3V4G9 280 aa2.54□□□□□ -2
VPS41-207ENST00000439468 H0YCG3 227 aa2.54□□□□□ -2
VPS41-207ENST00000439468 K7EQM0 130 aa2.54□□□□□ -2
VPS41-207ENST00000439468 OR7A17O14581 309 aa2.54□□□□□ -2
VPS41-207ENST00000439468 PRRG1O14668 218 aa2.54□□□□□ -2
VPS41-207ENST00000439468 ANGPT2O15123 496 aa2.54□□□□□ -2
VPS41-207ENST00000439468 KIAA0754O94854 1291 aa2.54□□□□□ -2
VPS41-207ENST00000439468 KRT8P05787 483 aa2.54□□□□□ -2
VPS41-207ENST00000439468 PDHBP11177 359 aa2.54□□□□□ -2
VPS41-207ENST00000439468 PRG2P13727 222 aa2.54□□□□□ -2
VPS41-207ENST00000439468 POLR2EP19388 210 aaKnown RBP2.54□□□□□ -2
VPS41-207ENST00000439468 SERPINA2P20848 420 aa2.54□□□□□ -2
VPS41-207ENST00000439468 TBXA2RP21731 343 aa2.54□□□□□ -2
VPS41-207ENST00000439468 ZBTB25P24278 435 aa2.54□□□□□ -2
VPS41-207ENST00000439468 PSMA2P25787 234 aa2.54□□□□□ -2
VPS41-207ENST00000439468 CHI3L1P36222 383 aaPredicted RBP2.54□□□□□ -2
VPS41-207ENST00000439468 IGLV3-21P80748 117 aaPredicted RBP2.54□□□□□ -2
VPS41-207ENST00000439468 OTUD4Q01804 1114 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms