RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 C16orf62Q7Z3J2 963 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 APOBEC3FQ8IUX4 373 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 MTURNQ8N3F0 131 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 CADM2Q8N3J6 435 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 SYT14Q8NB59 555 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 STEAP2Q8NFT2 490 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 PELI1Q96FA3 418 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 MS4A14Q96JA4 679 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 CYP2S1Q96SQ9 504 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 DPH7Q9BTV6 452 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 VCX2Q9H322 139 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 PPDPFQ9H3Y8 114 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 CAB39LQ9H9S4 337 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 SLC17A5Q9NRA2 495 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 AIPL1Q9NZN9 384 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 ZNF221Q9UK13 617 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 CLEC4EQ9ULY5 219 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 CLEC4AQ9UMR7 237 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 RPH3ALQ9UNE2 315 aa2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 SAMD4AQ9UPU9 718 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-204ENST00000438419 ANKRD30BQ9BXX2 1392 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 CLRN2A0PK11 232 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 NPIPA7E9PJI5 369 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 BTN3A3O00478 584 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 OR7A17O14581 309 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 PRRG1O14668 218 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 ARPC3O15145 178 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 MSH4O15457 936 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 NUDT21O43809 227 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 SPAG6O75602 509 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 H2BFMP0C1H6 154 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 CCDC166P0CW27 439 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 NPIPA8P0DM63 369 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 PCMT1P22061 227 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 LAP3P28838 519 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 EPHX2P34913 555 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 RGRP47804 291 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 RPL29P47914 159 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 UBE2HP62256 183 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 MRPS11P82912 194 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 CSTF1Q05048 431 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 MAJINQ3KP22 176 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 TP53I3Q53FA7 332 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 CENPPQ6IPU0 288 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 FAM71F2Q6NXP2 309 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 SYT10Q6XYQ8 523 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 CCDC80Q76M96 950 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 MOB3BQ86TA1 216 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 TMEM110Q86TL2 294 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 UBQLNLQ8IYU4 475 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 OR10A7Q8NGE5 316 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 OR13F1Q8NGS4 319 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 SLC5A11Q8WWX8 675 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 CELF6Q96J87 481 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 C7orf34Q96L11 122 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 TGM7Q96PF1 710 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 KIR2DL4Q99706 377 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 SPATA16Q9BXB7 569 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 YTHDF1Q9BYJ9 559 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 NANSQ9NR45 359 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 IL36GQ9NZH8 169 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 SPRR3Q9UBC9 169 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 RIMS3Q9UJD0 308 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 KLHL21Q9UJP4 597 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 NPIPA1Q9UND3 350 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 MAB21L2Q9Y586 359 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 FLVCR1Q9Y5Y0 555 aa2.66□□□□□ -1.98
TRAPPC13-204ENST00000438419 CCDC180Q9P1Z9 1646 aa2.65□□□□□ -1.98
TRAPPC13-204ENST00000438419 ARAP1Q96P48 1450 aa2.65□□□□□ -1.98
TRAPPC13-204ENST00000438419 FRMPD3Q5JV73 1810 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 ATRXP46100 2492 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 PTCH1Q13635 1447 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 A0A1W2PNV4 684 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 DHRS7CA6NNS2 312 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 E7ENQ6 273 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 KIF2AO00139 706 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 SNNO75324 88 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 ZNF44P15621 663 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 VDAC1P21796 283 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 RDXP35241 583 aaKnown RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 STARP49675 285 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 P2RY4P51582 365 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 RPS8P62241 208 aaKnown RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 HMGN5P82970 282 aaKnown RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 MAP2K1Q02750 393 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 PDK3Q15120 406 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 PAGE2BQ5JRK9 111 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 ZNF658Q5TYW1 1059 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 WSCD1Q658N2 575 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 ATL3Q6DD88 541 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 FAM199XQ6PEV8 388 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 TPRA1Q86W33 373 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 VSTM4Q8IW00 320 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 PRR22Q8IZ63 422 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 CLEC4FQ8N1N0 589 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 DHRSXQ8N5I4 330 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 KIR3DL3Q8N743 410 aa2.65□□□□□ -1.99
TRAPPC13-204ENST00000438419 C15orf54Q8N8G6 183 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms