RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PCGF3Q3KNV8 242 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 S100A7AQ86SG5 101 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 C14orf119Q9NWQ9 140 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 B3GALT1Q9Y5Z6 326 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 SLC43A1O75387 559 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 SERPINA5P05154 406 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 FAM69AQ5T7M9 428 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 TMEM130Q8N3G9 435 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 OR1J2Q8NGS2 313 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 ZFPM2Q8WW38 1151 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 FER1L6-AS2Q96M78 137 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 OR5B12Q96R08 314 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 HS3ST3A1Q9Y663 406 aa14.87□□□□□ -0.03
PTPN13-204ENST00000436978 ATXN1LP0C7T5 689 aaKnown RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 HES5Q5TA89 166 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 PTCRAQ6ISU1 281 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 HTR6P50406 440 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 ZNF789Q5FWF6 425 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 NIPAL3Q6P499 406 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 GPR149Q86SP6 731 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 FAM160A2Q8N612 972 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 APMAPQ9HDC9 416 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 PTH2RP49190 550 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 ZFP41Q8N8Y5 198 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 EDAQ92838 391 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 SLC39A13Q96H72 371 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 WDR37Q9Y2I8 494 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 PCDHGA8Q9Y5G5 932 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 EIF2DP41214 584 aaKnown RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 TAS2R20P59543 309 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 CDK5R2Q13319 367 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 PAGE3Q5JUK9 113 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 KCTD20Q7Z5Y7 419 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 OR8J2Q8NGG1 315 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 UCN3Q969E3 161 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 MUCL1Q96DR8 90 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 RTP3Q9BQQ7 232 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 AGPAT4Q9NRZ5 378 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 SDK1Q7Z5N4 2213 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 PKLRP30613 574 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 FOXA1P55317 472 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 LMF1Q96S06 567 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 CACNG3O60359 315 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 CTSCP53634 463 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 ZNF791Q3KP31 576 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 C3orf38Q5JPI3 329 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 UBTD2Q8WUN7 234 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 PRRT1Q99946 306 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 IL20RAQ9UHF4 553 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 STK11Q15831 433 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 SHISA6Q6ZSJ9 500 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 TMEM151AQ8N4L1 468 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 ELSPBP1Q96BH3 223 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 ZMYND19Q96E35 227 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 UHRF1Q96T88 793 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 ZNF576Q9H609 170 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 ERVK13-1Q9NX77 482 aa14.86□□□□□ -0.03
PTPN13-204ENST00000436978 CNOT2Q9NZN8 540 aaKnown RBP14.86□□□□□ -0.03
PTPN13-204ENST00000436978 A0A1W2PQL4 384 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 GOSR2O14653 212 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 DNASE1P24855 282 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 EXOSC7Q15024 291 aaKnown RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 METTL11BQ5VVY1 283 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 BORCS7Q96B45 105 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 OR6C1Q96RD1 312 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 ABCA3Q99758 1704 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 ZNF264O43296 627 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 RPS5P46782 204 aaKnown RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 TMEM163Q8TC26 289 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 NUBP2Q9Y5Y2 271 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 H0YGG7 62 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 H0YIV9 168 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 AKAIN1P0CW23 69 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 LRRC26Q2I0M4 334 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 SORBS1Q9BX66 1292 aaKnown RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 SSX5O60225 188 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 GABBR2O75899 941 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 YOD1Q5VVQ6 348 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 HACD4Q5VWC8 232 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 ADIPOR2Q86V24 386 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 ANKRD13BQ86YJ7 626 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 PLPP6Q8IY26 295 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 GLYATL2Q8WU03 294 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 LIN28AQ9H9Z2 209 aaKnown RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 AIFM1O95831 613 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 WDPCPO95876 746 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 TUBG1P23258 451 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 SLC6A20Q9NP91 592 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 PCDHB10Q9UN67 800 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 RBBP6Q7Z6E9 1792 aaKnown RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 A0A087WUU8 490 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 ZNF701M0R085 212 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 ALDOBP05062 364 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 MEPCEQ7L2J0 689 aaKnown RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 OR6Q1Q8NGQ2 317 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 OR2A12Q8NGT7 310 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 FAM71F1Q96KD3 344 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-204ENST00000436978 LHPPQ9H008 270 aa14.85□□□□□ -0.03
PTPN13-204ENST00000436978 RNF212BA8MTL3 300 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms