RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ZNF264O43296 627 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 KIAA0513O60268 411 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 SS18L1O75177 396 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-204ENST00000430682 STX11O75558 287 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 H6PDO95479 791 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 NUDT14O95848 222 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 PGRP06401 933 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 THBDP07204 575 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 CD8BP10966 210 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 UBL4AP11441 157 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 LOXP28300 417 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-204ENST00000430682 UGT2B10P36537 528 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 CLNS1AP54105 237 aaKnown RBP11.18□□□□□ -0.62
SMPD4-204ENST00000430682 CHRNEQ04844 493 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 QPRTQ15274 297 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 SYPL1Q16563 259 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 TMEM176BQ3YBM2 270 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-204ENST00000430682 BHLHB9Q6PI77 547 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 SPATA19Q7Z5L4 167 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 RNF130Q86XS8 419 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 ANKFN1Q8N957 763 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 ZNF527Q8NB42 609 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 FAM71CQ8NEG0 241 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 ATP6V1C2Q8NEY4 427 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 OR9I1Q8NGQ6 314 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 OR5W2Q8NH69 310 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 ROPN1LQ96C74 230 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 DACH2Q96NX9 599 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 PLSCR4Q9NRQ2 329 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 C6orf203Q9P0P8 240 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-204ENST00000430682 ING1Q9UK53 422 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-204ENST00000430682 PCDHGB4Q9UN71 923 aa11.18□□□□□ -0.62
SMPD4-204ENST00000430682 IGHV3-15A0A0B4J1V0 119 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 DUXAA6NLW8 204 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 EIF4E2O60573 245 aaKnown RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 ERLIN1O75477 346 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 CYP7B1O75881 506 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 SOX30O94993 753 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 UBTFL6P0CB48 400 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 CD1EP15812 388 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 EDNRAP25101 427 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 ADH6P28332 368 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 PGM1P36871 562 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 EIF1P41567 113 aaKnown RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 CCR4P51679 360 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 MVDP53602 400 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 CARD18P57730 90 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 EEF1A1P68104 462 aaKnown RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 FGFBP1Q14512 234 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 ZNF239Q16600 458 aaKnown RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 DPY19L1Q2PZI1 675 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 GTDC1Q4AE62 458 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 TTMPQ5BVD1 217 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 AGBL2Q5U5Z8 902 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 EEF1A1P5Q5VTE0 462 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 ATG16L1Q676U5 607 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 NXNQ6DKJ4 435 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 C16orf62Q7Z3J2 963 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 NUFIP2Q7Z417 695 aaKnown RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 TMCO5AQ8N6Q1 288 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 PNPT1Q8TCS8 783 aaKnown RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 ABHD3Q8WU67 409 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 CNOT9Q92600 299 aaKnown RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 GMPPAQ96IJ6 420 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 OR52E6Q96RD3 313 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 PRRG4Q9BZD6 226 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 LAT2Q9GZY6 243 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 SLC38A1Q9H2H9 487 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 SLCO1B3Q9NPD5 702 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 PROCRQ9UNN8 238 aa11.17□□□□□ -0.62
SMPD4-204ENST00000430682 GPC6Q9Y625 555 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-204ENST00000430682 USF3Q68DE3 2245 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 TRPC5OSA6NMA1 111 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 H3BNH8 94 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 ATE1O95260 518 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 AK1P00568 194 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 CSTAP01040 98 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 CHRM4P08173 479 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 FCGR2AP12318 317 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 POU2F1P14859 743 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 ENPP1P22413 925 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 ELK4P28324 431 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 AGTR1P30556 359 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 CHI3L1P36222 383 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-204ENST00000430682 PCYT1AP49585 367 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 SUMO3P55854 103 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-204ENST00000430682 SESN3P58005 492 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 EXOC3L2Q2M3D2 409 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 TIGD2Q4W5G0 525 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 PDCD4Q53EL6 469 aaKnown RBP11.16□□□□□ -0.62
SMPD4-204ENST00000430682 PAMR1Q6UXH9 720 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 DNAJC14Q6Y2X3 702 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-204ENST00000430682 STAC2Q6ZMT1 411 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 ZNF621Q6ZSS3 439 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 KIRREL3Q8IZU9 778 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 ZNF619Q8N2I2 560 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 OR6K3Q8NGY3 331 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 RAB3IL1Q8TBN0 382 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms