RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 BPIFCQ8NFQ6 507 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPPL2AQ8TCT8 520 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 ARNTL2Q8WYA1 636 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 ANKRD9Q96BM1 317 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 C10orf35Q96D05 121 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 C11orf70Q9BRQ4 267 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 LRRC61Q9BV99 259 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 TM2D1Q9BX74 207 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 TSSK1BQ9BXA7 367 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 STMN4Q9H169 189 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 NXF5Q9H1B4 397 aaKnown RBP2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 GLT8D2Q9H1C3 349 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 NUDT4Q9NZJ9 180 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 THEGQ9P2T0 379 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC7A8Q9UHI5 535 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 RPH3ALQ9UNE2 315 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 EIF3LQ9Y262 564 aaKnown RBP2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 DHRS7Q9Y394 339 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 FRMPD4Q14CM0 1322 aa2.37□□□□□ -2.03
HMGB1P9-201ENST00000429856 PLEKHG2Q9H7P9 1386 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 NPIPA5A0A0B4J1W7 369 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 A0A1B0GTQ1 180 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 A0A1W2PPV9 198 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SAGE2PA6NJ88 616 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 PCP4L1A6NKN8 68 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RNF212BA8MTL3 300 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 TCP11X1B4DZS4 312 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 NPIPA5E9PKD4 350 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPECC1L-ADORA2AF8WAN1 911 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SOCS3O14543 225 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 MSH4O15457 936 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RNF113AO15541 343 aaKnown RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 AKR7A2O43488 359 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RNF13O43567 381 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RAMP3O60896 148 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CDH16O75309 829 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CRLF1O75462 422 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 DIRAS1O95057 198 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 LRATO95237 230 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CST1P01037 141 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 ALPIP09923 528 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 UMPSP11172 480 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 DBTP11182 482 aaKnown RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 ATP1B2P14415 290 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 MX1P20591 662 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 IDSP22304 550 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 TUBG1P23258 451 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 HMGB2P26583 209 aaKnown RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CALML3P27482 149 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 NF2P35240 595 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC11A1P49279 550 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 DUSP3P51452 185 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 EFNB2P52799 333 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 MFAP2P55001 183 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 HADHBP55084 474 aaKnown RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CSTF1Q05048 431 aaKnown RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 LIPEQ05469 1076 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPAG1Q07617 926 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CALCOCO2Q13137 446 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 STK11Q15831 433 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 PPP1R3AQ16821 1122 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CYBRD1Q53TN4 286 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 MS4A13Q5J8X5 152 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPANXN2Q5MJ10 180 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 FAM199XQ6PEV8 388 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 C19orf35Q6ZS72 473 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 STOX1Q6ZVD7 989 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 MOB3BQ86TA1 216 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR2L13Q8N349 312 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 KIR3DL3Q8N743 410 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR2L3Q8NG85 312 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR4D9Q8NGE8 314 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR1L6Q8NGR2 347 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RFESDQ8TAC1 157 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 KCNG3Q8TAE7 436 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 FLVCR1-AS1Q8TAF5 88 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 FAM222BQ8WU58 562 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CRYGNQ8WXF5 182 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 TM4SF19Q96DZ7 209 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SDSLQ96GA7 329 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 TIMD4Q96H15 378 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RPRD1AQ96P16 312 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 LGMNQ99538 433 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 CHP1Q99653 195 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 BPIFA3Q9BQP9 254 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC30A2Q9BRI3 323 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPATA16Q9BXB7 569 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 DUSP16Q9BY84 665 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 PARD6BQ9BYG5 372 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RHBGQ9H310 441 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 XKR8Q9H6D3 395 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 PANK3Q9H999 370 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 NEK6Q9HC98 313 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 POLD4Q9HCU8 107 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 TUBG2Q9NRH3 451 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 PRPF19Q9UMS4 504 aaKnown RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 SCML2Q9UQR0 700 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 PDE10AQ9Y233 779 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 RASD1Q9Y272 281 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 AK6Q9Y3D8 172 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms