RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MSRB2Q9Y3D2 182 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 RTTNQ86VV8 2226 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 H0YC42 278 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 EI24O14681 340 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 CLOCKO15516 846 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SERPINB7O75635 380 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 PPM1BO75688 479 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 NGFRP08138 427 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 GALNSP34059 522 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 CAPGP40121 348 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 PTGDSP41222 190 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ACAA2P42765 397 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ATP12AP54707 1039 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 TPD52P55327 224 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ADARB1P78563 741 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 EXOC3L2Q2M3D2 409 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 IFI44LQ53G44 452 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 PATL1Q86TB9 770 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 KRT73Q86Y46 540 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC34A3Q8N130 599 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 DRAXINQ8NBI3 349 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 CLEC1AQ8NC01 280 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC7A13Q8TCU3 470 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ASB15Q8WXK1 588 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SPACA9Q96E40 222 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 YTHDF1Q9BYJ9 559 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 TBL1XR1Q9BZK7 514 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SAP130Q9H0E3 1048 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 NMNAT1Q9HAN9 279 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ATP13A2Q9NQ11 1180 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 MAN2C1Q9NTJ4 1040 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SMPD3Q9NY59 655 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC7A7Q9UM01 511 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 LIPT1Q9Y234 373 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SERINC4A6NH21 518 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 NDUFB5O43674 189 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 FADS1O60427 444 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 E2F6O75461 281 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 HPP00738 406 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ADRB1P08588 477 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 CELA3AP09093 270 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 PEPDP12955 493 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 KRT20P35900 424 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 CASP3P42574 277 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 STK32CQ86UX6 486 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF786Q8N393 782 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 DHRSXQ8N5I4 330 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 PFN4Q8NHR9 129 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 MAGEE2Q8TD90 523 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 GTPBP3Q969Y2 492 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF300Q96RE9 604 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 CCNL2Q96S94 520 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 MCHR1Q99705 422 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 METTL7AQ9H8H3 244 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF71Q9NQZ8 489 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 C20orf141Q9NUB4 165 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 CNIH4Q9P003 139 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 SEC14L4Q9UDX3 406 aa8.69□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZGRF1Q86YA3 2104 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 H0YAE9 185 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 GTPBP1O00178 669 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SCDO00767 359 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 LDLRP01130 860 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 IFNW1P05000 195 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SERPINA7P05543 415 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 RPS4Y1P22090 263 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 IDH2P48735 452 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 NRG3P56975 720 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 MLF1P58340 268 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 CDC20Q12834 499 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SNTA1Q13424 505 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 DCTN2Q13561 401 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 TOMM20Q15388 145 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 COL28A1Q2UY09 1125 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF791Q3KP31 576 aaPredicted RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 FNDC7Q5VTL7 733 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZCCHC12Q6PEW1 402 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 CYP4Z2PQ8N1L4 340 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 FAM81AQ8TBF8 368 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 M1APQ8TC57 530 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 HGDQ93099 445 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ISOC1Q96CN7 298 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ART5Q96L15 291 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF578Q96N58 590 aaPredicted RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 DOK1Q99704 481 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 NIPSNAP1Q9BPW8 284 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 CCDC86Q9H6F5 360 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF552Q9H707 407 aaPredicted RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 UBQLN4Q9NRR5 601 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ACER3Q9NUN7 267 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 RPS6KA6Q9UK32 745 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SAMHD1Q9Y3Z3 626 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 KCNMB2Q9Y691 235 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 CACNA1CQ13936 2221 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SPTAN1Q13813 2472 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ASH1LQ9NR48 2969 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 MYO18BQ8IUG5 2567 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZC3H12DA2A288 527 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 NEURL1O76050 574 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms