RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SIT1Q9Y3P8 196 aa8.4□□□□□ -1.06
CTNND1-208ENST00000428599 FAM189A1O60320 539 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 GALR3O60755 368 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-208ENST00000428599 TOXO94900 526 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 ETFAP13804 333 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 TAS2R30P59541 319 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 HABP2Q14520 560 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-208ENST00000428599 MBTPS1Q14703 1052 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 DCST2Q5T1A1 773 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 KIAA1211LQ6NV74 962 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 FAM83HQ6ZRV2 1179 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-208ENST00000428599 RBMXL3Q8N7X1 1067 aaKnown RBP8.4□□□□□ -1.07
CTNND1-208ENST00000428599 TIMD4Q96H15 378 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 MUS81Q96NY9 551 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 CENPOQ9BU64 300 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 SYNPO2LQ9H987 977 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 HCFC2Q9Y5Z7 792 aa8.4□□□□□ -1.07
CTNND1-208ENST00000428599 GABRR3A8MPY1 467 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 C12orf71A8MTZ7 269 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 FAM171A2A8MVW0 826 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SURF4O15260 269 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 AP1G1O43747 822 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SCRG1O75711 98 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 C7P10643 843 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SSR4P51571 173 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 GSCP56915 257 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 OR8B8Q15620 311 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 CLVS2Q5SYC1 327 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 FCRLBQ6BAA4 426 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ASRGL1Q7L266 308 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 KCTD20Q7Z5Y7 419 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ACBD4Q8NC06 268 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MDGA1Q8NFP4 955 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 FKRPQ9H9S5 495 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MARCH4Q9P2E8 410 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 KCND3Q9UK17 655 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 CBLCQ9ULV8 474 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 STRCQ7RTU9 1775 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 NOTOA8MTQ0 251 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 GABARAPH6UMI1 98 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TNFSF12O43508 249 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 UGDHO60701 494 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TBX10O75333 385 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 GABARAPO95166 117 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 GAAP10253 952 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 IL7P13232 177 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 CHATP28329 748 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SNCAP37840 140 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 AQP2P41181 271 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 GPR176Q14439 515 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SLC14A2Q15849 920 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SSX2Q16385 188 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 C2orf76Q3KRA6 126 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 PDLIM3Q53GG5 364 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 IL20RBQ6UXL0 311 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 DPPA4Q7L190 304 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF551Q7Z340 670 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZFP41Q8N8Y5 198 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TEX19Q8NA77 164 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 BBS1Q8NFJ9 593 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 OR52R1Q8NGF1 315 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SGK3Q96BR1 496 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TCTN2Q96GX1 697 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 RTP3Q9BQQ7 232 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 FAM117AQ9C073 453 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 EPHX3Q9H6B9 360 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SOX17Q9H6I2 414 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 RPH3ALQ9UNE2 315 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MED16Q9Y2X0 877 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 PRSS38A1L453 326 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 A8MV72 311 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF705FA8MVS1 300 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SIGLEC6O43699 453 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TP53P04637 393 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ITGB2P05107 769 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 STSP08842 583 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF705DP0CH99 300 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF705BP0CI00 300 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 OSMP13725 252 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ARSBP15848 533 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MAOBP27338 520 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 GK3PQ14409 553 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 C6orf132Q5T0Z8 1188 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 PM20D2Q8IYS1 436 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 KLF16Q9BXK1 252 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TMEM45AQ9NWC5 275 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 C14orf119Q9NWQ9 140 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TESQ9UGI8 421 aaKnown RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF225Q9UK10 706 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 IER3IP1Q9Y5U9 82 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TOGARAM1Q9Y4F4 1720 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 OR5H15A6NDH6 313 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 OR5H14A6NHG9 310 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 OR5H1A6NKK0 313 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 C17orf112F2Z3M2 114 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ADAM12O43184 909 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 PAHP00439 452 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 HOXC13P31276 330 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms