RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SEMA6CQ9H3T2 930 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 ZDHHC3Q9NYG2 299 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 TAAR2Q9P1P5 351 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 PTPN13Q12923 2485 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 PMS2P1A4D2B8 440 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 ARL5CA6NH57 179 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 COLCA2A8K830 154 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 LRRN3E7EW58 273 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 H7C417 338 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 OGG1O15527 345 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 GPRIN2O60269 458 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 PRF1P14222 555 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 MAPK8P45983 427 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 ARHGDIBP52566 201 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 PCBP4P57723 403 aaKnown RBP4.78□□□□□ -1.64
RIF1-203ENST00000428287 RPS24P62847 133 aaKnown RBP4.78□□□□□ -1.64
RIF1-203ENST00000428287 DSC1Q08554 894 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 CRHR2Q13324 411 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 SERTAD2Q14140 314 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 ATPAF1Q5TC12 328 aaPredicted RBP4.78□□□□□ -1.64
RIF1-203ENST00000428287 SLC36A4Q6YBV0 504 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 APCDD1Q8J025 514 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 LNX2Q8N448 690 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 UPF1Q92900 1129 aaKnown RBP eCLIP4.78□□□□□ -1.64
RIF1-203ENST00000428287 NARS2Q96I59 477 aaKnown RBP4.78□□□□□ -1.64
RIF1-203ENST00000428287 SMIM14Q96QK8 99 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 EFCAB11Q9BUY7 163 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 UBQLN3Q9H347 655 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 LRRN3Q9H3W5 708 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 ACKR4Q9NPB9 350 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 MTFP1Q9UDX5 166 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 MRTO4Q9UKD2 239 aaKnown RBP4.78□□□□□ -1.64
RIF1-203ENST00000428287 HIVEP3Q5T1R4 2406 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 SMIM30A4D0T7 59 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 MCIDASD6RGH6 385 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 SSX5O60225 188 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 PLATP00750 562 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 SERPINA3P01011 423 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 EPHX1P07099 455 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 PVALBP20472 110 aaPredicted RBP4.77□□□□□ -1.65
RIF1-203ENST00000428287 AGTR1P30556 359 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 GDNFP39905 211 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 PREPP48147 710 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 GPR15P49685 360 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 DGCR2P98153 550 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 TNFRSF17Q02223 184 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 TMEM88Q6PEY1 159 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 ASB18Q6ZVZ8 466 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CLEC1AQ8NC01 280 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 KLHDC9Q8NEP7 349 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 NFKBIDQ8NI38 313 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 SLC5A11Q8WWX8 675 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 KLHL1Q9NR64 748 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 TVP23BQ9NYZ1 205 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 A0A1W2PQH9 124 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 NUDT19A8MXV4 375 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 ALDOBP05062 364 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CHRM5P08912 532 aaPredicted RBP4.77□□□□□ -1.65
RIF1-203ENST00000428287 SHC1P29353 583 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 OR10A3P58181 314 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CXADRP78310 365 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 MBOAT1Q6ZNC8 495 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 TMEM17Q86X19 198 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 RNF175Q8N4F7 328 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 PXT1Q8NFP0 134 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 LKAAEAR1Q8TD35 194 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 EDAQ92838 391 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 RNFT2Q96EX2 444 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 ZNF607Q96SK3 696 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CXorf36Q9H7Y0 433 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CUTCQ9NTM9 273 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 MLXQ9UH92 298 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 TIMM13Q9Y5L4 95 aaPredicted RBP4.77□□□□□ -1.65
RIF1-203ENST00000428287 OR6C75A6NL08 312 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 IL9P15248 144 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 ABOP16442 354 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 MAS1LP35410 378 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CEACAM6P40199 344 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CDH4P55283 916 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CDNFQ49AH0 187 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CORO6Q6QEF8 472 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 DEF8Q6ZN54 512 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 KRT78Q8N1N4 520 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 ARMC10Q8N2F6 343 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 SAT2Q96F10 170 aaPredicted RBP4.77□□□□□ -1.65
RIF1-203ENST00000428287 PELI1Q96FA3 418 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 SIPA1Q96FS4 1042 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 SEC11CQ9BY50 192 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 PLEKHA6Q9Y2H5 1048 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 CEP295Q9C0D2 2601 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 TMEM272A0A1B0GTI8 110 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 ANKRD20A5PA0PJZ0 165 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 ARPC5O15511 151 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 OR2F2O95006 317 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 RPLP2P05387 115 aaKnown RBP4.77□□□□□ -1.65
RIF1-203ENST00000428287 ADCYAP1P18509 176 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 FPR3P25089 353 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 IMPA1P29218 277 aa4.77□□□□□ -1.65
RIF1-203ENST00000428287 SSBP1Q04837 148 aaKnown RBP4.77□□□□□ -1.65
RIF1-203ENST00000428287 ILF3Q12906 894 aaKnown RBP eCLIP4.77□□□□□ -1.652e-9■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms