RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 TMEM120BA0PK00 339 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 PRAMEF27A3QJZ7 478 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 ETV2O00321 342 aaPredicted RBP16.48■□□□□ 0.23
NUP50-207ENST00000424634 DNAJA2O60884 412 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 STX11O75558 287 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 THBDP07204 575 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 TUBBP07437 444 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 UBL4AP11441 157 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 LOXP28300 417 aaPredicted RBP16.48■□□□□ 0.23
NUP50-207ENST00000424634 IL12AP29459 219 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 RIPPLY3P57055 190 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 ADAM8P78325 824 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 FUT5Q11128 374 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 QPRTQ15274 297 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 ZNF239Q16600 458 aaKnown RBP16.48■□□□□ 0.23
NUP50-207ENST00000424634 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 SAXO2Q658L1 398 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 TNFAIP8L2Q6P589 184 aaPredicted RBP16.48■□□□□ 0.23
NUP50-207ENST00000424634 STAC2Q6ZMT1 411 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 ABHD3Q8WU67 409 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 XAGE5Q8WWM1 108 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 ZG16BQ96DA0 208 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 MRGPRX4Q96LA9 322 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 THUMPD3Q9BV44 507 aaKnown RBP16.48■□□□□ 0.23
NUP50-207ENST00000424634 ZNF350Q9GZX5 532 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 LAT2Q9GZY6 243 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 COQ10BQ9H8M1 238 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 GLRX2Q9NS18 164 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 ZNF226Q9NYT6 803 aa16.48■□□□□ 0.23
NUP50-207ENST00000424634 C9JVG2 144 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 SNNO75324 88 aaPredicted RBP16.47■□□□□ 0.23
NUP50-207ENST00000424634 BCAS1O75363 584 aaPredicted RBP16.47■□□□□ 0.23
NUP50-207ENST00000424634 AK1P00568 194 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 AGTR1P30556 359 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 S100A3P33764 101 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 FOXD4Q12950 439 aaPredicted RBP16.47■□□□□ 0.23
NUP50-207ENST00000424634 SKP2Q13309 424 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 FAM174BQ3ZCQ3 159 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 TYW3Q6IPR3 259 aaKnown RBP16.47■□□□□ 0.23
NUP50-207ENST00000424634 C16orf62Q7Z3J2 963 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 KIRREL3Q8IZU9 778 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 TMCO5AQ8N6Q1 288 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 VPS37AQ8NEZ2 397 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 TOR1AIP2Q8NFQ8 470 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 MGARPQ8TDB4 240 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 RNF128Q8TEB7 428 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 NEURL3Q96EH8 262 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 PIK3IP1Q96FE7 263 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 HS3ST6Q96QI5 342 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 WDR55Q9H6Y2 383 aaPredicted RBP16.47■□□□□ 0.23
NUP50-207ENST00000424634 C12orf49Q9H741 205 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 EXD2Q9NVH0 621 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 AIG1Q9NVV5 245 aa16.47■□□□□ 0.23
NUP50-207ENST00000424634 ARID1AO14497 2285 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 E9PBE3 544 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 CYP7B1O75881 506 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 EPHA3P29320 983 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 CCR4P51679 360 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 CLNS1AP54105 237 aaKnown RBP16.46■□□□□ 0.23
NUP50-207ENST00000424634 CBFBQ13951 182 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 GTF2IRD2BQ6EKJ0 949 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 NUFIP2Q7Z417 695 aaKnown RBP16.46■□□□□ 0.23
NUP50-207ENST00000424634 GTF2IRD2Q86UP8 949 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 CXorf67Q86X51 503 aaPredicted RBP16.46■□□□□ 0.23
NUP50-207ENST00000424634 TUSC5Q8IXB3 177 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 CPNE4Q96A23 557 aaPredicted RBP16.46■□□□□ 0.23
NUP50-207ENST00000424634 CCDC115Q96NT0 180 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 INPP5KQ9BT40 448 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 SAP130Q9H0E3 1048 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 QRSL1Q9H0R6 528 aaKnown RBP16.46■□□□□ 0.23
NUP50-207ENST00000424634 TIGARQ9NQ88 270 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 THAP1Q9NVV9 213 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 MARCOQ9UEW3 520 aaPredicted RBP16.46■□□□□ 0.23
NUP50-207ENST00000424634 BTNL2Q9UIR0 455 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 GPR45Q9Y5Y3 372 aa16.46■□□□□ 0.23
NUP50-207ENST00000424634 RAI1Q7Z5J4 1906 aaPredicted RBP16.45■□□□□ 0.22
NUP50-207ENST00000424634 DSCAMO60469 2012 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 GOLGA8QA0A0J9YX86 632 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 A0A1W2PNR3 127 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 GOLGA8OA6NCC3 632 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 GJE1A6NN92 205 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 GOLGA8NF8WBI6 632 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 HDAC3O15379 428 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 KLF4O43474 513 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 KIAA0513O60268 411 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 CSTAP01040 98 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 GUSBP08236 651 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 UBTFL6P0CB48 400 aaPredicted RBP16.45■□□□□ 0.22
NUP50-207ENST00000424634 KITP10721 976 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 ENPP1P22413 925 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 HOXC12P31275 282 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 PGM1P36871 562 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 CDKN2CP42773 168 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 SESN3P58005 492 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 DPY19L1Q2PZI1 675 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 TIGD2Q4W5G0 525 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 FRRS1Q6ZNA5 592 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 SPATA19Q7Z5L4 167 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 HMGN2P46Q86SG4 172 aa16.45■□□□□ 0.22
NUP50-207ENST00000424634 KRTAP1-3Q8IUG1 177 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms