RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 GMFGO60234 142 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 PABPC4LP0CB38 370 aaKnown RBP16.66■□□□□ 0.26
HDAC6-205ENST00000423941 UBTFL6P0CB48 400 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-205ENST00000423941 PEPDP12955 493 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 AGAP20933 346 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 CBFBQ13951 182 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 SCARB2Q14108 478 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 C1orf185Q5T7R7 199 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 NSUN5P2Q63ZY6 315 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 TMEM211Q6ICI0 200 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 SEM1Q6ZVN7 128 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 C11orf65Q8NCR3 313 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 HIPK4Q8NE63 616 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 OR5M1Q8NGP8 315 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 OR10A6Q8NH74 314 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 ST8SIA1Q92185 356 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 SLC35B4Q969S0 331 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 MRGPRX4Q96LA9 322 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF583Q96ND8 569 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 PSMG3-AS1Q96PY0 264 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 EFCAB1Q9HAE3 211 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF232Q9UNY5 417 aa16.66■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF443Q9Y2A4 671 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-205ENST00000423941 CD8B2A6NJW9 211 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 SHISA8B8ZZ34 492 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ZG16O60844 167 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 DCTN3O75935 186 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 GLI4P10075 376 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ESRRAP11474 423 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 PGCP20142 388 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ELK4P28324 431 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ACAA2P42765 397 aaKnown RBP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 SUCLG1P53597 346 aaKnown RBP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 RAC1P63000 192 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 LARS2Q15031 903 aaKnown RBP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 QPRTQ15274 297 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 SF3B4Q15427 424 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ACSF3Q4G176 576 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 LIN52Q52LA3 116 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 RPTNQ6XPR3 784 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 B3GNT6Q6ZMB0 384 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF836Q6ZNA1 936 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 GGNQ86UU5 652 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 CLIP4Q8N3C7 705 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ITLN2Q8WWU7 325 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 RNF145Q96MT1 663 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 LRRC37BQ96QE4 947 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 HOPXQ9BPY8 73 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-205ENST00000423941 CALHM2Q9HA72 323 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 ACER3Q9NUN7 267 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 RLIMQ9NVW2 624 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 CAMK2AQ9UQM7 478 aa16.65■□□□□ 0.26
HDAC6-205ENST00000423941 DOPEY1Q5JWR5 2465 aa16.64■□□□□ 0.26
HDAC6-205ENST00000423941 C5orf58C9J3I9 102 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 AIM2O14862 343 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 MFN2O95140 757 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 TCEA1P23193 301 aaKnown RBP16.64■□□□□ 0.25
HDAC6-205ENST00000423941 PRKAR1BP31321 381 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 CEACAM8P31997 349 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-205ENST00000423941 PCGF2P35227 344 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 TIMP3P35625 211 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 SLC6A8P48029 635 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 CLDN20P56880 219 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 SESN3P58005 492 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 FOXF1Q12946 379 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 VMACQ2NL98 169 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 GKAP1Q5VSY0 366 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-205ENST00000423941 DHRS4L2Q6PKH6 230 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 XKRXQ6PP77 449 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 NCCRP1Q6ZVX7 275 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-205ENST00000423941 CCDC80Q76M96 950 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 SLC30A8Q8IWU4 369 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 SLC15A3Q8IY34 581 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 ZNF440Q8IYI8 595 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 FBXO27Q8NI29 283 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 ADGRG7Q96K78 797 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 TUBA1CQ9BQE3 449 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 LRRK2Q5S007 2527 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 DOCK7Q96N67 2140 aa16.64■□□□□ 0.25
HDAC6-205ENST00000423941 MBD3L4A6NDZ8 208 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-205ENST00000423941 MBD3L3A6NE82 208 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-205ENST00000423941 MBD3L5A6NJ08 208 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-205ENST00000423941 KDM4EB2RXH2 506 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-205ENST00000423941 FAM47E-STBD1D6RA91 191 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 ADAMDEC1O15204 470 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 TOXO94900 526 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 NUDT14O95848 222 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 NUP107P57740 925 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 PMPCAQ10713 525 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 EPS8Q12929 822 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 VEZF1Q14119 521 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 CYP51A1Q16850 503 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 CTU2Q2VPK5 515 aaKnown RBP16.63■□□□□ 0.25
HDAC6-205ENST00000423941 ZNF311Q5JNZ3 666 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 KRT73Q86Y46 540 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 LACC1Q8IV20 430 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 ZNF808Q8N4W9 903 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-205ENST00000423941 MBD3L2Q8NHZ7 208 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-205ENST00000423941 TMEM234Q8WY98 164 aa16.63■□□□□ 0.25
HDAC6-205ENST00000423941 REXO5Q96IC2 774 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms