RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GCNT2Q8N0V5 402 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 LILRA2Q8N149 483 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 ANKFN1Q8N957 763 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 RELL2Q8NC24 303 aaPredicted RBP9.85□□□□□ -0.83
USP49-204ENST00000423567 OR2V1Q8NHB1 315 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 ZNF563Q8TA94 476 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 ST8SIA1Q92185 356 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 GTF2H4Q92759 462 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 ARSGQ96EG1 525 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 REXO5Q96IC2 774 aaKnown RBP9.85□□□□□ -0.83
USP49-204ENST00000423567 KLHL15Q96M94 604 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 THUMPD3Q9BV44 507 aaKnown RBP9.85□□□□□ -0.83
USP49-204ENST00000423567 PIGMQ9H3S5 423 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 TIGARQ9NQ88 270 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 MRGBPQ9NV56 204 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 KCNE5Q9UJ90 142 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 L3MBTL1Q9Y468 752 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 PCDHB14Q9Y5E9 798 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 PHF3Q92576 2039 aaKnown RBP9.85□□□□□ -0.83
USP49-204ENST00000423567 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 C5orf58C9J3I9 102 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 H0YC42 278 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 CLIC1O00299 241 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 SYT5O00445 386 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 ANGPT2O15123 496 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 ATP8B1O43520 1251 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 TGM6O95932 706 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 PLGP00747 810 aaPredicted RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 OPN1LWP04000 364 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 BCHEP06276 602 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 DBIP07108 87 aaKnown RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 CHRM4P08173 479 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 VIMP08670 466 aaKnown RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 PABPC4LP0CB38 370 aaKnown RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 ETFAP13804 333 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 PRKCAP17252 672 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 IGFBP2P18065 325 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 PSMA4P25789 261 aaKnown RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 SLC7A1P30825 629 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 SFTPDP35247 375 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 SLC6A8P48029 635 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 TPD52P55327 224 aaPredicted RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 FOXF2Q12947 444 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 FADDQ13158 208 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 MYBPHQ13203 477 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 SELENBP1Q13228 472 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 MAPK14Q16539 360 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 GTDC1Q4AE62 458 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 METTL21CQ5VZV1 264 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 AP1ARQ63HQ0 302 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 HBMQ6B0K9 141 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 PLXDC2Q6UX71 529 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 GGNQ86UU5 652 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 FUNDC1Q8IVP5 155 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 DMRTC2Q8IXT2 367 aaPredicted RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 CNEP1R1Q8N9A8 125 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 OR10D3Q8NH80 312 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 FNDC9Q8TBE3 224 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 POC1BQ8TC44 478 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 WDR60Q8WVS4 1066 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 FIG4Q92562 907 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 RNASE6Q93091 150 aaKnown RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 AURKBQ96GD4 344 aaPredicted RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 ZNF845Q96IR2 970 aaPredicted RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 PAIP1Q9H074 479 aaKnown RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 SLC38A1Q9H2H9 487 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 ARMC7Q9H6L4 198 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 EXOSC3Q9NQT5 275 aaKnown RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 SERINC1Q9NRX5 453 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 SLC6A13Q9NSD5 602 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 PACSIN3Q9UKS6 424 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 CORO2BQ9UQ03 480 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 SPIN1Q9Y657 262 aaPredicted RBP9.84□□□□□ -0.83
USP49-204ENST00000423567 UNC79Q9P2D8 2635 aa9.84□□□□□ -0.83
USP49-204ENST00000423567 FREM3P0C091 2139 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 NUP214P35658 2090 aaPredicted RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 CENPVL1A0A0U1RR11 272 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 A0A1W2PNV4 684 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 A0A1W2PP18 115 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 PRAMEF27A3QJZ7 478 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 AGAP5A6NIR3 686 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 EVPLLA8MZ36 301 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 TNFSF11O14788 317 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 ADAMDEC1O15204 470 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 CXCL13O43927 109 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 C1QCP02747 245 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 CAPN3P20807 821 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 RYKP34925 604 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 PGM1P36871 562 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 ARFIP2P53365 341 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 MVDP53602 400 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 CARD18P57730 90 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 GUCY1A3Q02108 690 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 LARS2Q15031 903 aaKnown RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 RGNQ15493 299 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 TOMM34Q15785 309 aaPredicted RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 ZSWIM7Q19AV6 140 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 TMEM176BQ3YBM2 270 aaPredicted RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 FBXL19-AS1Q494R0 122 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 LIN52Q52LA3 116 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms