RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 NDRG3Q9UGV2 375 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ICAM5Q9UMF0 924 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 PRSS51A0A1B0GVH4 220 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 DEFB108AA8MXU0 73 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 CASKO14936 926 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 EFNA2O43921 213 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 SS18L1O75177 396 aaPredicted RBP13.59□□□□□ -0.23
USB1-202ENST00000423271 CPSF4O95639 269 aaKnown RBP13.59□□□□□ -0.23
USB1-202ENST00000423271 NUDT14O95848 222 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 SFTPDP35247 375 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
USB1-202ENST00000423271 PCYT1AP49585 367 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 CASP9P55211 416 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 STX1BP61266 288 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 FGFBP1Q14512 234 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 EXOC3L2Q2M3D2 409 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 C22orf34Q6ZV56 151 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 ESPNLQ6ZVH7 1005 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 C6orf120Q7Z4R8 191 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 LILRA2Q8N149 483 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 GLB1L3Q8NCI6 653 aaPredicted RBP13.59□□□□□ -0.23
USB1-202ENST00000423271 OR4A15Q8NGL6 344 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 FBXO27Q8NI29 283 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 MBD6Q96DN6 1003 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 ARSGQ96EG1 525 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 SLC35G5Q96KT7 338 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 KLHL15Q96M94 604 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 ALPK1Q96QP1 1244 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 SDF2Q99470 211 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 MED18Q9BUE0 208 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 ELOVL5Q9NYP7 299 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 MCTS1Q9ULC4 181 aaKnown RBP13.59□□□□□ -0.23
USB1-202ENST00000423271 EMC9Q9Y3B6 208 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 DTNAQ9Y4J8 743 aa13.59□□□□□ -0.23
USB1-202ENST00000423271 PRR14LQ5THK1 2151 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 NF1P21359 2839 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 C16orf97H3BN30 126 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 SYNGR4O95473 234 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 PLGP00747 810 aaPredicted RBP13.58□□□□□ -0.24
USB1-202ENST00000423271 PGRP06401 933 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 NCF2P19878 526 aaPredicted RBP13.58□□□□□ -0.24
USB1-202ENST00000423271 MATN1P21941 496 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 ME2P23368 584 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 ELK4P28324 431 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 P2RX1P51575 399 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 POLR2JP52435 117 aaKnown RBP13.58□□□□□ -0.24
USB1-202ENST00000423271 ARFIP2P53365 341 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 KEAP1Q14145 624 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 DEFB113Q30KQ7 82 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 PDZK1Q5T2W1 519 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 ANKRD34AQ69YU3 496 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 BHLHB9Q6PI77 547 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 TGIF2LYQ8IUE0 185 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 TMCO5AQ8N6Q1 288 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 CHDHQ8NE62 594 aaPredicted RBP13.58□□□□□ -0.24
USB1-202ENST00000423271 VPS37AQ8NEZ2 397 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 OR6K3Q8NGY3 331 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 GPR119Q8TDV5 335 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 ZC3HAV1LQ96H79 300 aaKnown RBP13.58□□□□□ -0.24
USB1-202ENST00000423271 GMPPAQ96IJ6 420 aaPredicted RBP13.58□□□□□ -0.24
USB1-202ENST00000423271 OR52E6Q96RD3 313 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 SLC39A3Q9BRY0 314 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 SRXN1Q9BYN0 137 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 KLHL4Q9C0H6 718 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 OR51I1Q9H343 314 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 PAQR5Q9NXK6 330 aaPredicted RBP13.58□□□□□ -0.24
USB1-202ENST00000423271 KCNE5Q9UJ90 142 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 EDARQ9UNE0 448 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 ROS1P08922 2347 aa13.58□□□□□ -0.24
USB1-202ENST00000423271 FAM234BA2RU67 622 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 H3BNH8 94 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 GTPBP1O00178 669 aaKnown RBP13.57□□□□□ -0.24
USB1-202ENST00000423271 FCMRO60667 390 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 C1QCP02747 245 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 IL6P05231 212 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 UBL4AP11441 157 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 CD99P14209 185 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 NID1P14543 1247 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 PRKCAP17252 672 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 CD53P19397 219 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 CRYGSP22914 178 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 EIF1P41567 113 aaKnown RBP13.57□□□□□ -0.24
USB1-202ENST00000423271 ATP4BP51164 291 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 CCR4P51679 360 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 SUMO3P55854 103 aaPredicted RBP13.57□□□□□ -0.24
USB1-202ENST00000423271 CTBP2P56545 445 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 RIPPLY3P57055 190 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 SQLEQ14534 574 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 GPR68Q15743 365 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 ZNF239Q16600 458 aaKnown RBP13.57□□□□□ -0.24
USB1-202ENST00000423271 TIGD2Q4W5G0 525 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 FUNDC1Q8IVP5 155 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 ROBO4Q8WZ75 1007 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 OSTF1Q92882 214 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 PIK3IP1Q96FE7 263 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 CCDC115Q96NT0 180 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms