RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 ZG16O60844 167 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 WDR1O75083 606 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 SERPINB7O75635 380 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 CYP7B1O75881 506 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 PABPC4LP0CB38 370 aaKnown RBP16.94■□□□□ 0.3
MCF2L-214ENST00000423251 GABRA1P14867 456 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF17P17021 662 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 PGCP20142 388 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 ADH6P28332 368 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 SLC6A8P48029 635 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 NUDT2P50583 147 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 EEF1A1P68104 462 aaKnown RBP16.94■□□□□ 0.3
MCF2L-214ENST00000423251 VMACQ2NL98 169 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF311Q5JNZ3 666 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 MRPL2Q5T653 305 aaKnown RBP16.94■□□□□ 0.3
MCF2L-214ENST00000423251 RNF220Q5VTB9 566 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF440Q8IYI8 595 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 GTPBP8Q8N3Z3 284 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-214ENST00000423251 TMCO5AQ8N6Q1 288 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 OR5M9Q8NGP3 310 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 CNOT9Q92600 299 aaKnown RBP16.94■□□□□ 0.3
MCF2L-214ENST00000423251 WDYHV1Q96HA8 205 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 REXO5Q96IC2 774 aaKnown RBP16.94■□□□□ 0.3
MCF2L-214ENST00000423251 KLHDC3Q9BQ90 382 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 PRDM14Q9GZV8 571 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 ARL8BQ9NVJ2 186 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 STOML1Q9UBI4 398 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF337Q9Y3M9 751 aa16.94■□□□□ 0.3
MCF2L-214ENST00000423251 FIGNL2A6NMB9 653 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 E9PLN8 166 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 ETV2O00321 342 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-214ENST00000423251 CCL21O00585 134 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 BCAS1O75363 584 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-214ENST00000423251 PEPDP12955 493 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 TCEA1P23193 301 aaKnown RBP16.93■□□□□ 0.3
MCF2L-214ENST00000423251 PCGF2P35227 344 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 PTGER4P35408 488 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 LHX2P50458 406 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 PER3P56645 1201 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 PCBP3P57721 371 aaKnown RBP16.93■□□□□ 0.3
MCF2L-214ENST00000423251 PLAURQ03405 335 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 SF3B4Q15427 424 aaKnown RBP eCLIP16.93■□□□□ 0.3
MCF2L-214ENST00000423251 SLC25A53Q5H9E4 307 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 INTS11Q5TA45 600 aaKnown RBP16.93■□□□□ 0.3
MCF2L-214ENST00000423251 ERICH5Q6P6B1 374 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF836Q6ZNA1 936 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 SLC15A3Q8IY34 581 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 SLC35B4Q969S0 331 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 VKORC1Q9BQB6 163 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 PIF1Q9H611 641 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 CMTM6Q9NX76 183 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 DNAJB12Q9NXW2 375 aaKnown RBP16.93■□□□□ 0.3
MCF2L-214ENST00000423251 MEMO1Q9Y316 297 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 AP4B1Q9Y6B7 739 aa16.93■□□□□ 0.3
MCF2L-214ENST00000423251 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 PRORSD1PA6NEY8 169 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 ESRRAP11474 423 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-214ENST00000423251 PSMA4P25789 261 aaKnown RBP16.92■□□□□ 0.3
MCF2L-214ENST00000423251 ACVR2AP27037 513 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 PRKAR1BP31321 381 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 STARP49675 285 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 CCR4P51679 360 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 MNAT1P51948 309 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 DLX5P56178 289 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 VEZF1Q14119 521 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 QPRTQ15274 297 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 TOMM34Q15785 309 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-214ENST00000423251 DCST1Q5T197 706 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF585AQ6P3V2 769 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 MTFR2Q6P444 385 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 FJX1Q86VR8 437 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 CLIP4Q8N3C7 705 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 BHLHE22Q8NFJ8 381 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-214ENST00000423251 OR5M1Q8NGP8 315 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 POC1BQ8TC44 478 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 TMEM234Q8WY98 164 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 ST8SIA1Q92185 356 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 MRGPRX4Q96LA9 322 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 RLIMQ9NVW2 624 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 SH3BGRL2Q9UJC5 107 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 CHST2Q9Y4C5 530 aa16.92■□□□□ 0.3
MCF2L-214ENST00000423251 ABCA12Q86UK0 2595 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 HEATR5AQ86XA9 2040 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 FAM220BPB1ANY3 271 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 M0QX08 132 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 FAAHO00519 579 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 GCM2O75603 506 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-214ENST00000423251 MFN2O95140 757 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 NTN1O95631 604 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF708P17019 499 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 PRKCAP17252 672 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 AQP1P29972 269 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 CLDN18P56856 261 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 PSME3P61289 254 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 TMEM211Q6ICI0 200 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 DHRS4L2Q6PKH6 230 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 CCDC80Q76M96 950 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 ZNF550Q7Z398 422 aa16.91■□□□□ 0.3
MCF2L-214ENST00000423251 PATL1Q86TB9 770 aaKnown RBP16.91■□□□□ 0.3
MCF2L-214ENST00000423251 ULK2Q8IYT8 1036 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms