RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 GSK3BP49841 420 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF750Q32MQ0 723 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZDHHC16Q969W1 377 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 SLC5A7Q9GZV3 580 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 FBXL4Q9UKA2 621 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 CLDN25C9JDP6 229 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 ANXA3P12429 323 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 POU3F1Q03052 451 aaPredicted RBP15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 C5orf46Q6UWT4 87 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 CLEC14AQ86T13 490 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF554Q86TJ5 538 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 AURKBQ96GD4 344 aaPredicted RBP15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 P4HTMQ9NXG6 502 aa15.8■□□□□ 0.12
SYNGAP1-202ENST00000418600 SLCO2B1O94956 709 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 CHRM4P08173 479 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 PAX7P23759 505 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 ACTC1P68032 377 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 ACTA1P68133 377 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 VMACQ2NL98 169 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 LETMD1Q6P1Q0 360 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 SPRED2Q7Z698 418 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 CT55Q8WUE5 264 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 FAM46AQ96IP4 442 aaKnown RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF845Q96IR2 970 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 PAPOLGQ9BWT3 736 aaKnown RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 CSNK1G2P78368 415 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZXDBP98169 803 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 FBXL14Q8N1E6 418 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 OR8H1Q8NGG4 311 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 CD3GP09693 182 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 FPR1P21462 350 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 GCGRP47871 477 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 CCNJQ5T5M9 372 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 SSX6Q7RTT6 188 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 OR5M9Q8NGP3 310 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 WDR20Q8TBZ3 569 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 NTMT1Q9BV86 223 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF471Q9BX82 626 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 ELOVL3Q9HB03 270 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 PLXNB2O15031 1838 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 HTR5AP47898 357 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 AP2S1P53680 142 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 C6orf52Q5T4I8 152 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 CYS1Q717R9 158 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 OR4K13Q8NH42 304 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 GRPEL2Q8TAA5 225 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 TUBA8Q9NY65 449 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 BTNL2Q9UIR0 455 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 POMT2Q9UKY4 750 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 ALG5Q9Y673 324 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 FUT1P19526 365 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 GNB2P62879 340 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 IGFN1Q86VF2 1251 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 TP53I13Q8NBR0 393 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 MINDY2Q8NBR6 621 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 OR8K3Q8NH51 312 aa15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 YTHDF1Q9BYJ9 559 aaKnown RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 NXF5Q9H1B4 397 aaKnown RBP15.79■□□□□ 0.12
SYNGAP1-202ENST00000418600 GINS1Q14691 196 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 SLC27A4Q6P1M0 643 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 MARCH3Q86UD3 253 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 SLC35F3Q8IY50 421 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF709Q8N972 641 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 GPR87Q9BY21 358 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 NELFAQ9H3P2 528 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 MOV10Q9HCE1 1003 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 KCNJ16Q9NPI9 418 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 SNTG1Q9NSN8 517 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 TRIM64BA6NI03 449 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 RHCEP18577 417 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 MVKQ03426 396 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 SEMA3BQ13214 749 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 PLCXD3Q63HM9 321 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 THAP6Q8TBB0 222 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 PDLIM5Q96HC4 596 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 TMEM68Q96MH6 324 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 MYH10P35580 1976 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 SLC22A20A6NK97 555 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF806P0C7X5 589 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 LHCGRP22888 699 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 PACRGLQ8N7B6 248 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF740Q8NDX6 193 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 B3GNT7Q8NFL0 401 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 TMED9Q9BVK6 235 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 SLC22A4Q9H015 551 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 NPFFR2Q9Y5X5 522 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 PPP1R3DO95685 299 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 CSN2P05814 226 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 RFC3P40938 356 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 TSFMP43897 325 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 PGFP49763 221 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 SH3BP2P78314 561 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 VRK3Q8IV63 474 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 H1FXQ92522 213 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF566Q969W8 418 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 QSER1Q2KHR3 1735 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 NDUFB2O95178 105 aa15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 OXSR1O95747 527 aaPredicted RBP15.78■□□□□ 0.12
SYNGAP1-202ENST00000418600 ZNF12P17014 697 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms