RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 QPRTQ15274 297 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 LIN52Q52LA3 116 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 SLC25A53Q5H9E4 307 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 COQ5Q5HYK3 327 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 HMGN2P46Q86SG4 172 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 RETREG3Q86VR2 466 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 GRAMD2AQ8IUY3 354 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 POC1BQ8TC44 478 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 ST8SIA1Q92185 356 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 ZFP3Q96NJ6 502 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 CGREF1Q99674 301 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 CPPED1Q9BRF8 314 aaPredicted RBP16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 BCL2L10Q9HD36 194 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 KCNJ16Q9NPI9 418 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 PAQR5Q9NXK6 330 aaPredicted RBP16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 CAPN7Q9Y6W3 813 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 CACNA1DQ01668 2161 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 GJE1A6NN92 205 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 FAM90A27PA6NNH2 459 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 ETV2O00321 342 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 DVL2O14641 736 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 CCDC22O60826 627 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 NTN1O95631 604 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 THBS1P07996 1170 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 NUDT7P0C024 238 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 LSP1P33241 339 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 LARS2Q15031 903 aaKnown RBP16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 TOMM34Q15785 309 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 ZSWIM7Q19AV6 140 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 SLC25A35Q3KQZ1 300 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 RPS26P11Q5JNZ5 115 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 MRPL2Q5T653 305 aaKnown RBP16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 SPATA21Q7Z572 469 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 GGNQ86UU5 652 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 OR52P1PQ8NH57 321 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 FBXO27Q8NI29 283 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 BBS10Q8TAM1 723 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 MAL2Q969L2 176 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 ANKRD27Q96NW4 1050 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 NPAS1Q99742 590 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 IKZF5Q9H5V7 419 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 TMEM38AQ9H6F2 299 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 ZNF629Q9UEG4 869 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 ZNF232Q9UNY5 417 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 ZNF175Q9Y473 711 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 CRYBG3Q68DQ2 2970 aa16.22■□□□□ 0.19
SEMA3B-201ENST00000416295 MYO9AB2RTY4 2548 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 SLC22A20A6NK97 555 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 CLDN24A6NM45 220 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 H0YC42 278 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 EIF1AYO14602 144 aaKnown RBP16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 ARAFP10398 606 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 SEC24CP53992 1094 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 TPD52P55327 224 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 CLDN15P56746 228 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 SELENBP1Q13228 472 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 SGCBQ16585 318 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 TRMT5Q32P41 509 aaKnown RBP16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 MMEL1Q495T6 779 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 PDSS1Q5T2R2 415 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 RNF220Q5VTB9 566 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 ESPNLQ6ZVH7 1005 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 P4HA3Q7Z4N8 544 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 ZNF440Q8IYI8 595 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 LILRA2Q8N149 483 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 C9orf106Q8NAJ2 232 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 NAXEQ8NCW5 288 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 ZNF563Q8TA94 476 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 CNOT9Q92600 299 aaKnown RBP16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 ELAC2Q9BQ52 826 aaKnown RBP16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 PINK1Q9BXM7 581 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 ARMC7Q9H6L4 198 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 TMEM185BQ9H7F4 350 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 DNAJB12Q9NXW2 375 aaKnown RBP16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 ZNF443Q9Y2A4 671 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 IFT52Q9Y366 437 aa16.21■□□□□ 0.19
SEMA3B-201ENST00000416295 CELSR2Q9HCU4 2923 aa16.21■□□□□ 0.18
SEMA3B-201ENST00000416295 MED12Q93074 2177 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 FBP2O00757 339 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 ADAMDEC1O15204 470 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 HNRNPRO43390 633 aaKnown RBP16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 BCAS1O75363 584 aaPredicted RBP16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 RCBTB2O95199 551 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 PGM3O95394 542 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 NPPAP01160 153 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 TMIGD3P0DMS9 266 aaPredicted RBP16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 FCGR2AP12318 317 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 UQCRBP14927 111 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 ETS2P15036 469 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 CTSSP25774 331 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 GRNP28799 593 aaKnown RBP16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 RYKP34925 604 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 OPRM1P35372 400 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 EIF1AXP47813 144 aaKnown RBP16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 ZNF136P52737 540 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 SESN3P58005 492 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 CDK6Q00534 326 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 CYLC2Q14093 348 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms