RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ACSS1Q9NUB1 689 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SMOXQ9NWM0 555 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 C1orf109Q9NX04 203 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GAR1Q9NY12 217 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GPR83Q9NYM4 423 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PIPOXQ9P0Z9 390 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 COPS7AQ9UBW8 275 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SLC23A1Q9UHI7 598 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ZDHHC2Q9UIJ5 367 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 NXT1Q9UKK6 140 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 RAB26Q9ULW5 256 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ICAM5Q9UMF0 924 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 KCNIP3Q9Y2W7 256 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PPIAL4AQ9Y536 164 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 YIPF1Q9Y548 306 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 POGZQ7Z3K3 1410 aa3.34□□□□□ -1.88
SF3B1-203ENST00000414174 SMG6Q86US8 1419 aaKnown RBP3.34□□□□□ -1.88
SF3B1-203ENST00000414174 TAF1LQ8IZX4 1826 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM89A2RUT3 159 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TBC1D3FA6NER0 549 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CGB1A6NKQ9 187 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 AQP7P3A6NL99 342 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CCT8L1PA6NM43 557 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR11H12B2RN74 326 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 DISC1C4P0D8 188 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 H3BNX3 289 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 WNT10BO00744 389 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 MAGEB4O15481 346 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TEX33O43247 280 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SYNGR3O43761 229 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PCDH7O60245 1069 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RGS11O94810 467 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SCELO95171 688 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ETHE1O95571 254 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CYB5R3P00387 301 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ACSM4P0C7M7 580 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PET100P0DJ07 73 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 MBL2P11226 248 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ANXA3P12429 323 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CPN1P15169 458 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 NCK1P16333 377 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CALML3P27482 149 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PSMB4P28070 264 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 HIBADHP31937 336 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PRDX2P32119 198 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CCKBRP32239 447 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SSTR5P35346 364 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 AVPR1AP37288 418 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 GRIA3P42263 894 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RPL35P42766 123 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RGRP47804 291 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SOX2P48431 317 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SERPINB10P48595 397 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RBP2P50120 134 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 GPR143P51810 404 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 EFNA5P52803 228 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 LIMK2P53671 638 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CRYBA4P53673 196 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR4D2P58180 307 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 VSX2P58304 361 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CD81P60033 236 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ERVK11-1P61568 191 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RPS6P62753 249 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 HERVK_113P63132 956 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 LCN2P80188 198 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RPL19P84098 196 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 FAM3AP98173 230 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SLC34A1Q06495 639 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SRSF1Q07955 248 aaKnown RBP eCLIP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 GRB14Q14449 540 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ZNF169Q14929 603 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ATP6AP1Q15904 470 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TBR1Q16650 682 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RNF151Q2KHN1 245 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PGGHGQ32M88 737 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM176BQ3YBM2 270 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 FAM174BQ3ZCQ3 159 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ZBED5Q49AG3 693 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 AASDHQ4L235 1098 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RNASE10Q5GAN6 216 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR2B11Q5JQS5 317 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CXorf66Q5JRM2 361 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PPM1LQ5SGD2 360 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 AGAP7PQ5VUJ5 663 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 LPCAT4Q643R3 524 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR8G2PQ6IF36 304 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR52W1Q6IF63 320 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TCTN3Q6NUS6 607 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 UGT3A1Q6NUS8 523 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 LPCAT3Q6P1A2 487 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 MED27Q6P2C8 311 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 UNQ6494/PRO21346Q6UXR6 183 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ACOT7LQ6ZUV0 252 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 IL17RELQ6ZVW7 336 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 DET1Q7L5Y6 550 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 FAM220AQ7Z4H9 259 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM144Q7Z5S9 345 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SLC22A16Q86VW1 577 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 THOC6Q86W42 341 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM126BQ8IUX1 230 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms