RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	BAG5	Q9UL15	447 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	LIPG	Q9Y5X9	500 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	MED12L	Q86YW9	2145 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	SPEN	Q96T58	3664 aa	Known RBP	11.93	□□□□□ -0.5
SF1-206	ENST00000413725		A0A1B0GVC2	190 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	LINC01387	J3KSC0	135 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	AQP7	O14520	342 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	ZIC3	O60481	467 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	TPST1	O60507	370 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	BCAS1	O75363	584 aa	Predicted RBP	11.93	□□□□□ -0.5
SF1-206	ENST00000413725	C8B	P07358	591 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	NCK1	P16333	377 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	ZNF17	P17021	662 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	ME2	P23368	584 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	RYK	P34925	604 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	KCNJ5	P48544	419 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	NCALD	P61601	193 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	COPZ1	P61923	177 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	PLAUR	Q03405	335 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	GABPB1	Q06547	395 aa	Predicted RBP	11.93	□□□□□ -0.5
SF1-206	ENST00000413725	EPS8	Q12929	822 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	CEACAM7	Q14002	265 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	QPRT	Q15274	297 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	DUSP7	Q16829	419 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	CYBRD1	Q53TN4	286 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	GLYAT	Q6IB77	296 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	ATCAY	Q86WG3	371 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	SPPL2C	Q8IUH8	684 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	FAM156A	Q8NDB6	213 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	ST8SIA1	Q92185	356 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	MIB2	Q96AX9	1013 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	SARAF	Q96BY9	339 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	MUC13	Q9H3R2	512 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	STOML1	Q9UBI4	398 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	PRDM4	Q9UKN5	801 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	SLC9A8	Q9Y2E8	581 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.93	□□□□□ -0.5
SF1-206	ENST00000413725	CHST2	Q9Y4C5	530 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	SNX13	Q9Y5W8	968 aa		11.93	□□□□□ -0.5
SF1-206	ENST00000413725	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725		A0A1B0GTH9	108 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	C7orf72	A4D263	438 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	OR14I1	A6ND48	311 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	FAAH	O00519	579 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	DNAJC8	O75937	253 aa	Predicted RBP	11.92	□□□□□ -0.5
SF1-206	ENST00000413725	PDE5A	O76074	875 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	STAMBP	O95630	424 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	LGI1	O95970	557 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	ACTL6A	O96019	429 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	FES	P07332	822 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	GKN3P	P0CG01	181 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	GP1BB	P13224	206 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	ABO	P16442	354 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	PRKCA	P17252	672 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	CD247	P20963	164 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	CHM	P24386	653 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	CRYBA2	P53672	197 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	RGS8	P57771	180 aa	Predicted RBP	11.92	□□□□□ -0.5
SF1-206	ENST00000413725	HSF1	Q00613	529 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	FXN	Q16595	210 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	GLIPR1L2	Q4G1C9	344 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	ENPP6	Q6UWR7	440 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.92	□□□□□ -0.5
SF1-206	ENST00000413725	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.92	□□□□□ -0.5
SF1-206	ENST00000413725	GALNT11	Q8NCW6	608 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	GPR32P1	Q8NGA4	272 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	MCUR1	Q96AQ8	359 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	TPD52L3	Q96J77	140 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	MRGPRX4	Q96LA9	322 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	GORASP2	Q9H8Y8	452 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	TES	Q9UGI8	421 aa	Known RBP	11.92	□□□□□ -0.5
SF1-206	ENST00000413725	RPS6KA6	Q9UK32	745 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	SLC6A5	Q9Y345	797 aa		11.92	□□□□□ -0.5
SF1-206	ENST00000413725	INTS1	Q8N201	2190 aa	Known RBP	11.91	□□□□□ -0.5
SF1-206	ENST00000413725	OR2M5	A3KFT3	312 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	AP3D1	O14617	1153 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	BCKDK	O14874	412 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	ARPC2	O15144	300 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	FRS3	O43559	492 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	ZNF682	O95780	498 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	SERPINA1	P01009	418 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	ELK4	P28324	431 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	ADH6	P28332	368 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	PTGS2	P35354	604 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	MSX2	P35548	267 aa	Predicted RBP	11.91	□□□□□ -0.5
SF1-206	ENST00000413725	IDH2	P48735	452 aa	Known RBP	11.91	□□□□□ -0.5
SF1-206	ENST00000413725	SESN3	P58005	492 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	B3GALT5-AS1	P59052	145 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	SELENOW	P63302	87 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	FOXF1	Q12946	379 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	TOMM34	Q15785	309 aa	Predicted RBP	11.91	□□□□□ -0.5
SF1-206	ENST00000413725	TMEM44	Q2T9K0	475 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	SLC25A53	Q5H9E4	307 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	NHSL2	Q5HYW2	709 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	CBLL1	Q75N03	491 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	GRINA	Q7Z429	371 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	ZNF605	Q86T29	641 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	EID3	Q8N140	333 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	CADM2	Q8N3J6	435 aa		11.91	□□□□□ -0.5
SF1-206	ENST00000413725	ABTB1	Q969K4	478 aa	Predicted RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms