RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 STARD4Q96DR4 205 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 AURKBQ96GD4 344 aaPredicted RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ADGRG7Q96K78 797 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 TRNT1Q96Q11 434 aaKnown RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 RBM24Q9BX46 236 aaKnown RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 SLC38A1Q9H2H9 487 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 PIGMQ9H3S5 423 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 RNF122Q9H9V4 155 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 TPT1P8Q9HAU6 139 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 FOXD3Q9UJU5 478 aaPredicted RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 PACSIN3Q9UKS6 424 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 LIPT1Q9Y234 373 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ABCA12Q86UK0 2595 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 CLDN24A6NM45 220 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 SMNDC1O75940 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
LIMS4-201ENST00000413601 NTN1O95631 604 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 CRHP06850 196 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 NR2F1P10589 423 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 ETFAP13804 333 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 ELK4P28324 431 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 ADH6P28332 368 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 PGM1P36871 562 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 CRATP43155 626 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 KIR2DL2P43627 348 aaPredicted RBP13.29□□□□□ -0.28
LIMS4-201ENST00000413601 SLC6A8P48029 635 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 CPA2P48052 419 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 EEF1A1P68104 462 aaKnown RBP13.29□□□□□ -0.28
LIMS4-201ENST00000413601 SIRPAP78324 504 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 EEF1A1P5Q5VTE0 462 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 BLOC1S3Q6QNY0 202 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 BTLAQ7Z6A9 289 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 KIF18BQ86Y91 864 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 OR2V1Q8NHB1 315 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 GTF2H4Q92759 462 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 MRGPRX4Q96LA9 322 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 KLHL15Q96M94 604 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 PRRG4Q9BZD6 226 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 GALNT8Q9NY28 637 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 CRIM1Q9NZV1 1036 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 CCDC167Q9P0B6 97 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 PCDHB14Q9Y5E9 798 aa13.29□□□□□ -0.28
LIMS4-201ENST00000413601 A8MXE2 369 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 NR5A2O00482 541 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 EDF1O60869 148 aaKnown RBP13.28□□□□□ -0.28
LIMS4-201ENST00000413601 DNAJA2O60884 412 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 FCGR2AP12318 317 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 PGCP20142 388 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 PEX19P40855 299 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 CARD18P57730 90 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 SESN3P58005 492 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 KCNJ10P78508 379 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 MAPK11Q15759 364 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 TMEM176BQ3YBM2 270 aaPredicted RBP13.28□□□□□ -0.28
LIMS4-201ENST00000413601 SLC25A53Q5H9E4 307 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 PDSS1Q5T2R2 415 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 LRRC74BQ6ZQY2 392 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 FAM71CQ8NEG0 241 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 OIT3Q8WWZ8 545 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 OSTF1Q92882 214 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 PAIP1Q9H074 479 aaKnown RBP13.28□□□□□ -0.28
LIMS4-201ENST00000413601 MTHFD2LQ9H903 347 aaPredicted RBP13.28□□□□□ -0.28
LIMS4-201ENST00000413601 NPHS2Q9NP85 383 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.28□□□□□ -0.28
LIMS4-201ENST00000413601 PAQR5Q9NXK6 330 aaPredicted RBP13.28□□□□□ -0.28
LIMS4-201ENST00000413601 DCTN4Q9UJW0 460 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 MCTS1Q9ULC4 181 aaKnown RBP13.28□□□□□ -0.28
LIMS4-201ENST00000413601 SLC35A3Q9Y2D2 325 aa13.28□□□□□ -0.28
LIMS4-201ENST00000413601 PDZD2O15018 2839 aa13.27□□□□□ -0.28
LIMS4-201ENST00000413601 TUBAL3A6NHL2 446 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 AGAP5A6NIR3 686 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 MSTNO14793 375 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 SYNGR4O95473 234 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 CD1EP15812 388 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 RYKP34925 604 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 CPOXP36551 454 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 MAGEA8P43361 318 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 DSTNP60981 165 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 PLAURQ03405 335 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 GUSBP1Q15486 140 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 AGKQ53H12 422 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 TMEM200AQ86VY9 491 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 LINC01560Q8TB33 94 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 ST8SIA1Q92185 356 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 CNOT9Q92600 299 aaKnown RBP13.27□□□□□ -0.29
LIMS4-201ENST00000413601 SPDL1Q96EA4 605 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 OPN3Q9H1Y3 402 aaPredicted RBP13.27□□□□□ -0.29
LIMS4-201ENST00000413601 SLC52A3Q9NQ40 469 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 P2RX2Q9UBL9 471 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 LRBAP50851 2863 aa13.27□□□□□ -0.29
LIMS4-201ENST00000413601 A0A096LPI6 279 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 GJE1A6NN92 205 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 CLIC1O00299 241 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 ETV2O00321 342 aaPredicted RBP13.26□□□□□ -0.29
LIMS4-201ENST00000413601 PLGP00747 810 aaPredicted RBP13.26□□□□□ -0.29
LIMS4-201ENST00000413601 CGAP01215 116 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 BCHEP06276 602 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 TFPTP0C1Z6 253 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 IL7RP16871 459 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms