RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CENPEQ02224 2701 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 SLC22A20A6NK97 555 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 EIF1AYO14602 144 aaKnown RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 ADAMDEC1O15204 470 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 EFNA2O43921 213 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 RCBTB2O95199 551 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 IL18BPO95998 194 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 OPN1LWP04000 364 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 BCHEP06276 602 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 TMIGD3P0DMS9 266 aaPredicted RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 COX6B1P14854 86 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 IGFBP2P18065 325 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 PPIBP23284 216 aaKnown RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 ME2P23368 584 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 CTSSP25774 331 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 OPRM1P35372 400 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 CRISP3P54108 245 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 RPS3AP61247 264 aaKnown RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 SF3A3Q12874 501 aaKnown RBP eCLIP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 FOXF2Q12947 444 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 CBFBQ13951 182 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 PON3Q15166 354 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 QPRTQ15274 297 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 CTU2Q2VPK5 515 aaKnown RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 SLC25A53Q5H9E4 307 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 DLEU7Q6UYE1 221 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 RETREG3Q86VR2 466 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 CMIPQ8IY22 773 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 GCNT2Q8N0V5 402 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 LILRA2Q8N149 483 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 DPP10Q8N608 796 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 FNDC9Q8TBE3 224 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 TSPEARQ8WU66 669 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 WDR60Q8WVS4 1066 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 INTS12Q96CB8 462 aaKnown RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 TMEM19Q96HH6 336 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 ZNF845Q96IR2 970 aaPredicted RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 MRGPRX4Q96LA9 322 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 ZNF317Q96PQ6 595 aaPredicted RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 TREX2Q9BQ50 279 aaPredicted RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 IKZF5Q9H5V7 419 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 EXOSC3Q9NQT5 275 aaKnown RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 CALML5Q9NZT1 146 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 KLHL14Q9P2G3 628 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 LEF1Q9UJU2 399 aaPredicted RBP9.06□□□□□ -0.96
TMEM248-202ENST00000413593 NDUFAF1Q9Y375 327 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 ZNF175Q9Y473 711 aa9.06□□□□□ -0.96
TMEM248-202ENST00000413593 A0A0G2JPF8 293 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 A0A0J9YW62 118 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 TMEM247A6NEH6 219 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 HNRNPCL2B2RXH8 293 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 HNRNPCL3B7ZW38 293 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 ANGPT2O15123 496 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 HNRNPCL1O60812 293 aaKnown RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 ADAM11O75078 769 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 DBIP07108 87 aaKnown RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 SNRPB2P08579 225 aaKnown RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 HNRNPCL4P0DMR1 293 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 NID1P14543 1247 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 IL7RP16871 459 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 GPX2P18283 190 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 PGCP20142 388 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 SHC1P29353 583 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 EIF1AXP47813 144 aaKnown RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 ASCL1P50553 236 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 AGFG1P52594 562 aaKnown RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 DLX5P56178 289 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 SESN3P58005 492 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 GNA13Q14344 377 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 SGCBQ16585 318 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 FBXL19-AS1Q494R0 122 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 RUNDC3AQ59EK9 446 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 RPS26P11Q5JNZ5 115 aaPredicted RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 ESPNLQ6ZVH7 1005 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 P4HA3Q7Z4N8 544 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 DHDDSQ86SQ9 333 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 PEX5LQ8IYB4 626 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 C10orf111Q8N326 155 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 OR52P1PQ8NH57 321 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 OR10D3Q8NH80 312 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 OR2V1Q8NHB1 315 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 ST8SIA1Q92185 356 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 CNOT9Q92600 299 aaKnown RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 MAL2Q969L2 176 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 KLHL15Q96M94 604 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 CPPED1Q9BRF8 314 aaPredicted RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 SFXN3Q9BWM7 321 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 BCL2L10Q9HD36 194 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 A4GALTQ9NPC4 353 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 MRGBPQ9NV56 204 aa9.05□□□□□ -0.96
TMEM248-202ENST00000413593 DNAJB12Q9NXW2 375 aaKnown RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.05□□□□□ -0.96
TMEM248-202ENST00000413593 FREM3P0C091 2139 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 PHF3Q92576 2039 aaKnown RBP9.04□□□□□ -0.96
TMEM248-202ENST00000413593 A0A1W2PNV4 684 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 GJE1A6NN92 205 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 TNFSF11O14788 317 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 CXCL13O43927 109 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms