RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 ZBED8Q8IZ13 594 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 ZNF34Q8IZ26 560 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 MCOLN2Q8IZK6 566 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 SYS1Q8N2H4 156 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 ARFGAP1Q8N6T3 406 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 TTC29Q8NA56 475 aaPredicted RBP5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 OR5M1Q8NGP8 315 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 ZNF473Q8WTR7 871 aaKnown RBP5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 BPIFA2Q96DR5 249 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 NUS1Q96E22 293 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 TIMD4Q96H15 378 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 SERPINB11Q96P15 392 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 CCDC28BQ9BUN5 200 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 UPF3AQ9H1J1 476 aaKnown RBP5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 C1orf198Q9H425 327 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 NXF3Q9H4D5 531 aaKnown RBP5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 FOLH1BQ9HBA9 442 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 PNRC2Q9NPJ4 139 aaKnown RBP5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 ZC4H2Q9NQZ6 224 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 SLC17A5Q9NRA2 495 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 RNF146Q9NTX7 359 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 C2orf42Q9NWW7 574 aa5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 PRG3Q9Y2Y8 225 aaPredicted RBP5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 TSSC4Q9Y5U2 329 aaPredicted RBP5.26□□□□□ -1.57
CBX1P3-201ENST00000413296 CDC42BPGQ6DT37 1551 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 CHD4Q14839 1912 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ANKARQ7Z5J8 1434 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 RRBP1Q9P2E9 1410 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 C9orf118A6NHY6 69 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ZNF732B4DXR9 585 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 H3BN98 237 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 RHODO00212 210 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SH2D1BO14796 132 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 AIM2O14862 343 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ZBTB5O15062 677 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 B4GALT5O43286 388 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 B4GAT1O43505 415 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 HSBP1O75506 76 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 PRKRAO75569 313 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 FCN3O75636 299 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 KRT33AO76009 404 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 LRATO95237 230 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 NR3C1P04150 777 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 GPIP06744 558 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SLC35E2BP0CK96 405 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SLC35E2P0CK97 266 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SMIM10L1P0DMW3 83 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ANXA3P12429 323 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 PGAM1P18669 254 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 PGCP20142 388 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 BGNP21810 368 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 AADACP22760 399 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 GABRR2P28476 465 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 RBMS1P29558 406 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 HNRNPH1P31943 449 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 RPS19P39019 145 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 HNRNPH2P55795 449 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 MAGOHP61326 146 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 KLRC3Q07444 240 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 CYP24A1Q07973 514 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 PTPRRQ15256 657 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ALX1Q15699 326 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 TNXAQ16473 311 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 RSPO4Q2I0M5 234 aaPredicted RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 QRICH1Q2TAL8 776 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 TIGD2Q4W5G0 525 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 PHLDA2Q53GA4 152 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 AWAT1Q58HT5 328 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SLC27A4Q6P1M0 643 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 BHLHB9Q6PI77 547 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 LINGO4Q6UY18 593 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ZNF562Q6V9R5 426 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 TMEM184AQ6ZMB5 413 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 TMPRSS11AQ6ZMR5 421 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 C17orf107Q6ZR85 190 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SHFQ7M4L6 423 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 NET1Q7Z628 596 aaPredicted RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ANKRD37Q7Z713 158 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SPAG16Q8N0X2 631 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 CENPSQ8N2Z9 138 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 LIX1Q8N485 282 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 CPSF7Q8N684 471 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 OR11H4Q8NGC9 324 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 OR52E5Q8NH55 327 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 FGFBP3Q8TAT2 258 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 FAM110BQ8TC76 370 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SLC25A43Q8WUT9 341 aaPredicted RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 IRGQQ8WZA9 623 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 NR4A3Q92570 626 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 RAD51AP1Q96B01 352 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 MBD6Q96DN6 1003 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 SMIM10Q96HG1 83 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 DNAJC1Q96KC8 554 aaKnown RBP5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 TM2D2Q9BX73 214 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 PLA2G12BQ9BX93 195 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ULBP2Q9BZM5 246 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 TOLLIPQ9H0E2 274 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 TLE6Q9H808 572 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 ANKHQ9HCJ1 492 aa5.25□□□□□ -1.57
CBX1P3-201ENST00000413296 MLXIPLQ9NP71 852 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms