RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ADH6P28332 368 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 ZNF41P51814 821 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 EEF1A1P68104 462 aaKnown RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 PMPCAQ10713 525 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 QPRTQ15274 297 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 CTU2Q2VPK5 515 aaKnown RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 MRPL2Q5T653 305 aaKnown RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 RIPPLY2Q5TAB7 128 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 RNF220Q5VTB9 566 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 NANOGP8Q6NSW7 305 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 CPLX4Q7Z7G2 160 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 VRK2Q86Y07 508 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 LACC1Q8IV20 430 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 POU5F2Q8N7G0 328 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 NAXEQ8NCW5 288 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 OR52P1PQ8NH57 321 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 NFKBIDQ8NI38 313 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 RP9Q8TA86 221 aaKnown RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 BBS10Q8TAM1 723 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 LRRC58Q96CX6 371 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 ADGRG7Q96K78 797 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 THUMPD3Q9BV44 507 aaKnown RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 NANOGQ9H9S0 305 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 Q9UFV3 132 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 RNF6Q9Y252 685 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 ZNF443Q9Y2A4 671 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 GPC6Q9Y625 555 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 AP4B1Q9Y6B7 739 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 MED12LQ86YW9 2145 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 NBPF19A0A087WUL8 3843 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 A1L4Q6 167 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CLCA1A8K7I4 914 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 H0Y3Z8 333 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 GCM2O75603 506 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-210ENST00000412342 NPPAP01160 153 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 COX4I1P13073 169 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 ETS2P15036 469 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 IL7RP16871 459 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 ELK4P28324 431 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 SHC1P29353 583 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CEACAM8P31997 349 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-210ENST00000412342 EIF1P41567 113 aaKnown RBP11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CCR4P51679 360 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 SMSP52788 366 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CDK6Q00534 326 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 SRYQ05066 204 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CBFBQ13951 182 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CYLC2Q14093 348 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-210ENST00000412342 GNA13Q14344 377 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 LIN52Q52LA3 116 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 RABL3Q5HYI8 236 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 POMZP3Q6PJE2 187 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 XKRXQ6PP77 449 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 PLXDC2Q6UX71 529 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CALHM3Q86XJ0 350 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 GRAMD2AQ8IUY3 354 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CCDC71Q8IV32 467 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-210ENST00000412342 PEX5LQ8IYB4 626 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 ZZZ3Q8IYH5 903 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 TNIP2Q8NFZ5 429 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 OR8J3Q8NGG0 315 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 FBXO27Q8NI29 283 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 ST8SIA1Q92185 356 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 RND1Q92730 232 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 RCN3Q96D15 328 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 MRGPRX4Q96LA9 322 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 CALHM2Q9HA72 323 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
HDAC8-210ENST00000412342 TMEM247A6NEH6 219 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 FAM47E-STBD1D6RA91 191 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 FAAHO00519 579 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 AP3D1O14617 1153 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 SEC14L5O43304 696 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 SHOX2O60902 331 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-210ENST00000412342 CYP7B1O75881 506 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 NUDT14O95848 222 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 PABPC4LP0CB38 370 aaKnown RBP11.85□□□□□ -0.51
HDAC8-210ENST00000412342 PGCP20142 388 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 SLC6A2P23975 617 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 TIMP3P35625 211 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 SESN3P58005 492 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 RAC1P63000 192 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 RBBP4Q09028 425 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 ART3Q13508 389 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 SCARB2Q14108 478 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 MMEL1Q495T6 779 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 REEP3Q6NUK4 255 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 C8orf82Q6P1X6 216 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-210ENST00000412342 SERPINA11Q86U17 422 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 LIX1LQ8IVB5 337 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 UBQLNLQ8IYU4 475 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 CLIP4Q8N3C7 705 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 C9orf106Q8NAJ2 232 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 SDCCAG3Q96C92 435 aa11.85□□□□□ -0.51
HDAC8-210ENST00000412342 ZNF845Q96IR2 970 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-210ENST00000412342 TRIB1Q96RU8 372 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms