RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 CLEC18CQ8NCF0 446 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 BHLHE22Q8NFJ8 381 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 ST8SIA1Q92185 356 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 WDYHV1Q96HA8 205 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 MRGPRX4Q96LA9 322 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 RSPO3Q9BXY4 272 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 TP63Q9H3D4 680 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 RLIMQ9NVW2 624 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 ABCD2Q9UBJ2 740 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 SLC5A6Q9Y289 635 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 ZNF337Q9Y3M9 751 aa13.96□□□□□ -0.17
TRAPPC12-203ENST00000411973 DOPEY1Q5JWR5 2465 aa13.96□□□□□ -0.18
TRAPPC12-203ENST00000411973 ARHGAP21Q5T5U3 1957 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 PRORSD1PA6NEY8 169 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 FIGNL2A6NMB9 653 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 E9PLN8 166 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 M0QX08 132 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 FAAHO00519 579 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 NME4O00746 187 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 LRRTM2O43300 516 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 ADAM11O75078 769 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 WDR1O75083 606 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 PEPDP12955 493 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 GABRA1P14867 456 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 ZNF708P17019 499 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 PRKCAP17252 672 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 TCEA1P23193 301 aaKnown RBP13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 AQP1P29972 269 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 PTGER4P35408 488 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 CPA2P48052 419 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 CCR4P51679 360 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 SLC7A2P52569 658 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 CLDN18P56856 261 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 QPRTQ15274 297 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 PATL1Q86TB9 770 aaKnown RBP13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 EID3Q8N140 333 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 CLIP4Q8N3C7 705 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 OR2T12Q8NG77 320 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 OR5M9Q8NGP3 310 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 OR5M1Q8NGP8 315 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 POC1BQ8TC44 478 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 TMEM234Q8WY98 164 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 ZNF524Q96C55 264 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 NPAS1Q99742 590 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 VKORC1Q9BQB6 163 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 PIF1Q9H611 641 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 ACER3Q9NUN7 267 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 AP4B1Q9Y6B7 739 aa13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 SPTBN1Q01082 2364 aaKnown RBP13.95□□□□□ -0.18
TRAPPC12-203ENST00000411973 CFAP73A6NFT4 308 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 CCT8L1PA6NM43 557 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 AHRRA9YTQ3 701 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 SHISA8B8ZZ34 492 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 SEMA7AO75326 666 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 MFN2O95140 757 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ACVR2AP27037 513 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ELK4P28324 431 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 STARP49675 285 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 EEFSECP57772 596 aaKnown RBP13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 LIPEQ05469 1076 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 SRSF1Q07955 248 aaKnown RBP eCLIP13.94□□□□□ -0.182e-9■□□□□ 9.1
TRAPPC12-203ENST00000411973 FOXF1Q12946 379 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 SF3B4Q15427 424 aaKnown RBP eCLIP13.94□□□□□ -0.185e-6■■■■□ 26.7
TRAPPC12-203ENST00000411973 ZNF585AQ6P3V2 769 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ARMC8Q8IUR7 673 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ULK2Q8IYT8 1036 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 FBXO27Q8NI29 283 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ZPLD1Q8TCW7 415 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 PHF10Q8WUB8 498 aaKnown RBP13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 NSL1Q96IY1 281 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 RNF145Q96MT1 663 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 DMRTA2Q96SC8 542 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 PINK1Q9BXM7 581 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 SPAG4Q9NPE6 437 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 NDE1Q9NXR1 346 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 TMEM181Q9P2C4 612 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 STOML1Q9UBI4 398 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ERRFI1Q9UJM3 462 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 USP22Q9UPT9 525 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 MEMO1Q9Y316 297 aa13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 NCOA6Q14686 2063 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-203ENST00000411973 ELOVL7A1L3X0 281 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 CCL21O00585 134 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 TPST1O60507 370 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 UQCRBP14927 111 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 POU3F2P20265 443 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 RYKP34925 604 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 ACAA2P42765 397 aaKnown RBP13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 SESN3P58005 492 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 RAC1P63000 192 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 DMTNQ08495 405 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 EPS8Q12929 822 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 RTL6Q6ICC9 239 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 MTFR2Q6P444 385 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 TRPM8Q7Z2W7 1104 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 ZNF550Q7Z398 422 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 FJX1Q86VR8 437 aa13.93□□□□□ -0.18
TRAPPC12-203ENST00000411973 MICU2Q8IYU8 434 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms