RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 NDUFA9Q16795 377 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 PRSS41Q7RTY9 318 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 METTL27Q8N6F8 245 aaPredicted RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 NFKBIDQ8NI38 313 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 PHF21AQ96BD5 680 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 C11orf24Q96F05 449 aaPredicted RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 KATNB1Q9BVA0 655 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 APMAPQ9HDC9 416 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 LOXL2Q9Y4K0 774 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 H3BMH7 237 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ORC5O43913 435 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 HCN1O60741 890 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 HPGDSO60760 199 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 HIST1H1TP22492 207 aaPredicted RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ATP5A1P25705 553 aaKnown RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF91Q05481 1191 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 MLLT11Q13015 90 aaPredicted RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 IL18Q14116 193 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 RSPO4Q2I0M5 234 aaPredicted RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 CCNJQ5T5M9 372 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 TMEM65Q6PI78 240 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 TEX261Q6UWH6 196 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ACOT4Q8N9L9 421 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF680Q8NEM1 530 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 OR52P1PQ8NH57 321 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 AKAP1Q92667 903 aaKnown RBP eCLIP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 KIAA1143Q96AT1 154 aaPredicted RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 FCRL1Q96LA6 429 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 PIP5K1AQ99755 562 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 NDC1Q9BTX1 674 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 TSSK6Q9BXA6 273 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 GPATCH2Q9NW75 528 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 NDOR1Q9UHB4 597 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ELF5Q9UKW6 265 aaPredicted RBP13.25□□□□□ -0.29
MINDY4-202ENST00000409881 SLC22A7Q9Y694 548 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 U3KQ87 197 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 A0A0A6YYC8 382 aaPredicted RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 FITM1A5D6W6 292 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 GABRR3A8MPY1 467 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 INMT-MINDY4F8WBC2 141 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 I3L1I5 382 aaPredicted RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF749O43361 778 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 KLHL18O94889 574 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 DKK1O94907 266 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SMIM10L1P0DMW3 83 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF10P21506 573 aaPredicted RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 C1DQ13901 141 aaKnown RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 NCF4Q15080 339 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 TTLL10Q6ZVT0 673 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 KCTD20Q7Z5Y7 419 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 ARHGEF39Q8N4T4 335 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 OR4A15Q8NGL6 344 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 OR9A4Q8NGU2 314 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 C1GALT1C1Q96EU7 318 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SMIM10Q96HG1 83 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 MARVELD1Q9BSK0 173 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SLC7A5P2Q9GIP4 190 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 PPP1R3EQ9H7J1 279 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 DDX31Q9H8H2 851 aaKnown RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 ADAM29Q9UKF5 820 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SPIN1Q9Y657 262 aaPredicted RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 CNOT1A5YKK6 2376 aaKnown RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 DMXL1Q9Y485 3027 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 A0A0A6YYD5 115 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SGK494L7N484 410 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 TMPRSS11DO60235 418 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SLC43A1O75387 559 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 XCR1P46094 333 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 LIMS1P48059 325 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 INPP1P49441 399 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SNTA1Q13424 505 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SCARB2Q14108 478 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 CPTPQ5TA50 214 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 GARNL3Q5VVW2 1013 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 RAB11FIP2Q7L804 512 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 CDH24Q86UP0 819 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 PPP1R3BQ86XI6 285 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 BMPERQ8N8U9 685 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 GALNT11Q8NCW6 608 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 PROKR2Q8NFJ6 384 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF431Q8TF32 576 aaPredicted RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 KCTD7Q96MP8 289 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 TRAF4Q9BUZ4 470 aaPredicted RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 THSD1Q9NS62 852 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF224Q9NZL3 707 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 RABL2AQ9UBK7 228 aaPredicted RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 DHCR7Q9UBM7 475 aaKnown RBP13.24□□□□□ -0.29
MINDY4-202ENST00000409881 SCN3AQ9NY46 2000 aa13.24□□□□□ -0.29
MINDY4-202ENST00000409881 B3GALT2O43825 422 aa13.23□□□□□ -0.29
MINDY4-202ENST00000409881 GALR3O60755 368 aaPredicted RBP13.23□□□□□ -0.29
MINDY4-202ENST00000409881 APOL3O95236 402 aa13.23□□□□□ -0.29
MINDY4-202ENST00000409881 TIAF1O95411 115 aa13.23□□□□□ -0.29
MINDY4-202ENST00000409881 HLA-DQB1P01920 261 aa13.23□□□□□ -0.29
MINDY4-202ENST00000409881 AGFG1P52594 562 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms