RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ANGPT4Q9Y264 503 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 IFT52Q9Y366 437 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF337Q9Y3M9 751 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 MPDZO75970 2070 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 MBD3L4A6NDZ8 208 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 MBD3L3A6NE82 208 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 MBD3L5A6NJ08 208 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 CLCA1A8K7I4 914 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 PRSS44E7EML9 344 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 MRASO14807 208 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 OIP5O43482 229 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 DNAJA2O60884 412 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 CLDN1O95832 211 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 ARAFP10398 606 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 GP1BBP13224 206 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 ETS2P15036 469 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 PRKCAP17252 672 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SEC24CP53992 1094 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 CDK6Q00534 326 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SELENBP1Q13228 472 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SCARB2Q14108 478 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 QPRTQ15274 297 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SGCBQ16585 318 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 CYP51A1Q16850 503 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SLC25A53Q5H9E4 307 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 RPS26P11Q5JNZ5 115 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 MRPL2Q5T653 305 aaKnown RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 REP15Q6BDI9 236 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 REEP3Q6NUK4 255 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 ESPNLQ6ZVH7 1005 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 RETREG3Q86VR2 466 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SNX32Q86XE0 403 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SLC30A8Q8IWU4 369 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 MBD3L2Q8NHZ7 208 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 FBXO27Q8NI29 283 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 NFKBIDQ8NI38 313 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 RP9Q8TA86 221 aaKnown RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 WNT2BQ93097 391 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 ZG16BQ96DA0 208 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF607Q96SK3 696 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 TMEM38AQ9H6F2 299 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 CHST11Q9NPF2 352 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 GID8Q9NWU2 228 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 PRDM4Q9UKN5 801 aa9.84□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF443Q9Y2A4 671 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 SPIN1Q9Y657 262 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 ASH1LQ9NR48 2969 aaKnown RBP9.84□□□□□ -0.83
CHMP3-205ENST00000409810 HCFC1P51610 2035 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 A0A0G2JNJ9 132 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 LOC100653049A0A140TA62 436 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 FAM90A27PA6NNH2 459 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 SHISA8B8ZZ34 492 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 FBP2O00757 339 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 EIF1AYO14602 144 aaKnown RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 DVL2O14641 736 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 SNX3O60493 162 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 KRT34O76011 436 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 PGM3O95394 542 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 NUDT7P0C024 238 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 PABPC4LP0CB38 370 aaKnown RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 FCGR2AP12318 317 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 CD1EP15812 388 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 DRD4P21917 467 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 PSMA4P25789 261 aaKnown RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 HTR1EP28566 365 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 CEACAM8P31997 349 aaPredicted RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 HTR3AP46098 478 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 GYS2P54840 703 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 MTPNP58546 118 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 EEF1A1P68104 462 aaKnown RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 RBBP4Q09028 425 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 MAPK11Q15759 364 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 SLC25A35Q3KQZ1 300 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF311Q5JNZ3 666 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 RNF220Q5VTB9 566 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 EEF1A1P5Q5VTE0 462 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 OR2A2Q6IF42 318 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 C3orf33Q6P1S2 294 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF836Q6ZNA1 936 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF550Q7Z398 422 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 HMGN2P46Q86SG4 172 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 ADGRE4PQ86SQ3 457 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 SERPINA11Q86U17 422 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 C11orf65Q8NCR3 313 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 HIPK4Q8NE63 616 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 BHLHE22Q8NFJ8 381 aaPredicted RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 OR8J3Q8NGG0 315 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 LILRB4Q8NHJ6 448 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 POC1BQ8TC44 478 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 MAL2Q969L2 176 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 LRRC58Q96CX6 371 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 LRRC46Q96FV0 321 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 KLHL15Q96M94 604 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 SPATA9Q9BWV2 254 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 PINK1Q9BXM7 581 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 IKZF5Q9H5V7 419 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 KCNJ16Q9NPI9 418 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 TIGARQ9NQ88 270 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 SERINC1Q9NRX5 453 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms