RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 DHRS7Q9Y394 339 aa5.6□□□□□ -1.51
LSM5-203ENST00000409782 COX11Q9Y6N1 276 aa5.6□□□□□ -1.51
LSM5-203ENST00000409782 LRRK2Q5S007 2527 aa5.6□□□□□ -1.51
LSM5-203ENST00000409782 RP1L1Q8IWN7 2480 aaPredicted RBP5.6□□□□□ -1.51
LSM5-203ENST00000409782 IGHV4-28A0A0C4DH34 117 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 A0A1W2PPV9 198 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 DUXAA6NLW8 204 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 E7ESA3 106 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 MKRN2OSH3BPM6 223 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 J3QKU1 62 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 TTI1O43156 1089 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 TXNL1O43396 289 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 HCRTR1O43613 425 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 SLC28A2O43868 658 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 SRPX2O60687 465 aaPredicted RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 GAGE7O76087 117 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 CAPN1P07384 714 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 GAGE12FP0CL80 117 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 GAGE12GP0CL81 117 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 GAGE12IP0CL82 117 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 ERVK-10P10266 1014 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 NAGAP17050 411 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 CMPK1P30085 196 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 SLC6A6P31641 620 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 RPA3P35244 121 aaPredicted RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 IER3P46695 156 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 PROK1P58294 105 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 RPS18P62269 152 aaKnown RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 ABATP80404 500 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 DCDP81605 110 aaKnown RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 ZNF91Q05481 1191 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 ILF2Q12905 390 aaKnown RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 GAGE1Q13065 139 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 GAGE4Q13068 117 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 CUL1Q13616 776 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 SGCBQ16585 318 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 CCSMST1Q4G0I0 132 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 NKAIN1Q4KMZ8 207 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 LACTB2Q53H82 288 aaPredicted RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 FAM199XQ6PEV8 388 aaPredicted RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 TMPRSS11FQ6ZWK6 438 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 PIWIL4Q7Z3Z4 852 aaKnown RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 RAB43Q86YS6 212 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 CPNE9Q8IYJ1 553 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 C1orf52Q8N6N3 182 aaKnown RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 TTC29Q8NA56 475 aaPredicted RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 OR2AK2Q8NG84 335 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 PPP4R1Q8TF05 950 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 SMPDL3BQ92485 455 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 C5orf30Q96GV9 206 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 IP6K3Q96PC2 410 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 NDNQ99608 321 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 GPR21Q99679 349 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 SELENOSQ9BQE4 189 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 TRMOQ9BU70 441 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 SRD5A3Q9H8P0 318 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 AKIRIN1Q9H9L7 192 aaPredicted RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 RNPEPL1Q9HAU8 725 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 PLAC1Q9HBJ0 212 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 KLHL1Q9NR64 748 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 UTP6Q9NYH9 597 aaKnown RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 TAS2R13Q9NYV9 303 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 CIDEBQ9UHD4 219 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 NXT1Q9UKK6 140 aaKnown RBP5.59□□□□□ -1.51
LSM5-203ENST00000409782 FBXW2Q9UKT8 454 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 BLOC1S6Q9UL45 172 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 CHMP2BQ9UQN3 213 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 TEX264Q9Y6I9 313 aa5.59□□□□□ -1.51
LSM5-203ENST00000409782 PTPN13Q12923 2485 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 BSNQ9UPA5 3926 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 GFYI3L273 518 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 OVOL3O00110 214 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 PLOD2O00469 737 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 EIF3HO15372 352 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSM5-203ENST00000409782 ITM2AO43736 263 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 CTSVO60911 334 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 BANF1O75531 89 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 IGHV2-70P01814 119 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 IGHEP01854 428 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 C8GP07360 202 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 F7P08709 466 aaPredicted RBP5.58□□□□□ -1.52
LSM5-203ENST00000409782 EZRP15311 586 aaKnown RBP5.58□□□□□ -1.52
LSM5-203ENST00000409782 MPZP25189 248 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 PSMB5P28074 263 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 IMPA1P29218 277 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 CASQ1P31415 396 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 HSD17B3P37058 310 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 RPL3P39023 403 aaKnown RBP5.58□□□□□ -1.52
LSM5-203ENST00000409782 ELK3P41970 407 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 TBPL1P62380 186 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 RELAQ04206 551 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 CKAP4Q07065 602 aaKnown RBP5.58□□□□□ -1.52
LSM5-203ENST00000409782 PNRC1Q12796 327 aaPredicted RBP5.58□□□□□ -1.52
LSM5-203ENST00000409782 CALCOCO2Q13137 446 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 FASTKQ14296 549 aaKnown RBP5.58□□□□□ -1.52
LSM5-203ENST00000409782 C1orf189Q5VU69 101 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 ZNF425Q6IV72 752 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 FAM45BPQ6NSW5 357 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 Q6ZSV7 163 aa5.58□□□□□ -1.52
LSM5-203ENST00000409782 SLC26A11Q86WA9 606 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms