RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OR1A2Q9Y585 309 aa3.79□□□□□ -1.8
CLK1-203ENST00000409769 SMAD5-AS1Q9Y6J3 95 aa3.79□□□□□ -1.8
CLK1-203ENST00000409769 MDC1Q14676 2089 aaKnown RBP3.79□□□□□ -1.8
CLK1-203ENST00000409769 ASXL3Q9C0F0 2248 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RP1P56715 2156 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 SPTY2D1-AS1A0A0U1RR47 76 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 LOC101059948A0A1B0GTJ6 334 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 HYKKA2RU49 373 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 G3V2L1 256 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 GFYI3L273 518 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 NR5A2O00482 541 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 LIN7AO14910 233 aaPredicted RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 KMOO15229 486 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 BIRC5O15392 142 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 KERAO60938 352 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 PSIP1O75475 530 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 ERAL1O75616 437 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 POP7O75817 140 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 IGLV1-44P01699 117 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 APOA4P06727 396 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 BPGMP07738 259 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RBP1P09455 135 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 SP9P0CG40 484 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 THEGLP0DJG4 465 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 CA6P23280 308 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 PDHA2P29803 388 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 ALDH4A1P30038 563 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 GABRA5P31644 462 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 CEACAM8P31997 349 aaPredicted RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 MDH1P40925 334 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 WNT5AP41221 380 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RGS4P49798 205 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 KPNA2P52292 529 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 ATP6V0D1P61421 351 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 KCNJ10P78508 379 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 PLOD1Q02809 727 aaPredicted RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 CSTF1Q05048 431 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 OVGP1Q12889 678 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RPA4Q13156 261 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 SRSF5Q13243 272 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 P2RY6Q15077 328 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 OR4D1Q15615 310 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 PDK4Q16654 411 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 PHKG1Q16816 387 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 PPP1R3AQ16821 1122 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 FAM83EQ2M2I3 478 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 TTLL9Q3SXZ7 439 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 CCDC153Q494R4 210 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 DOK6Q6PKX4 331 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 ENPP7Q6UWV6 458 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 ZYG11AQ6WRX3 759 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RGS9BPQ6ZS82 235 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 Q6ZSR6 202 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 TMPRSS11FQ6ZWK6 438 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 OTOAQ7RTW8 1153 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 COMMD2Q86X83 199 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 KRTAP7-1Q8IUC3 87 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 TRAPPC5Q8IUR0 188 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 LYG1Q8N1E2 194 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 MARVELD2Q8N4S9 558 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 DEFB119Q8N690 84 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 MAPKAPK5-AS1Q8N8E1 139 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 OR5M8Q8NGP6 311 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 STAG3L4Q8TBR4 150 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RDH11Q8TC12 318 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 EEF1AKMT1Q8WVE0 214 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 ASZ1Q8WWH4 475 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 CKAP2Q8WWK9 683 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 ATL1Q8WXF7 558 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 OR1E3Q8WZA6 343 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 ELMO1Q92556 727 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 OR2M4Q96R27 311 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 NUDT16L1Q9BRJ7 211 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 TSSK1BQ9BXA7 367 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 LAT2Q9GZY6 243 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 OR52A5Q9H2C5 316 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 DPEP2Q9H4A9 486 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RDH14Q9HBH5 336 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 TM9SF3Q9HD45 589 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 MRPL40Q9NQ50 206 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 SLC35C2Q9NQQ7 365 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 ZNF71Q9NQZ8 489 aaPredicted RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 INTS9Q9NV88 658 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 SPHK1Q9NYA1 384 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 SLC23A2Q9UGH3 650 aa3.78□□□□□ -1.8
CLK1-203ENST00000409769 RUVBL2Q9Y230 463 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 ASCC3Q8N3C0 2202 aaKnown RBP3.78□□□□□ -1.8
CLK1-203ENST00000409769 GPR179Q6PRD1 2367 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 UNC13CQ8NB66 2214 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 NEMP2A6NFY4 417 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 A8MT66 165 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ARHGEF33A8MVX0 844 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 MEI4A8MW99 385 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TLR4O00206 839 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CDC7O00311 574 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 PLOD2O00469 737 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 KLF11O14901 512 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TAPBPO15533 448 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ADAM20O43506 726 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 SHOX2O60902 331 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms