RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF385DQ9H6B1 395 aa16.14■□□□□ 0.17
PDLIM2-206ENST00000409141 CCDC134Q9H6E4 229 aa16.14■□□□□ 0.17
PDLIM2-206ENST00000409141 SLC25A37Q9NYZ2 338 aa16.14■□□□□ 0.17
PDLIM2-206ENST00000409141 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 CLDN24A6NM45 220 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 EFNA2O43921 213 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 IL18BPO95998 194 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 BCHEP06276 602 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 DBIP07108 87 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 IL7RP16871 459 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 HOXB9P17482 250 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 ELK4P28324 431 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 RYKP34925 604 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 MDH1P40925 334 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 CRISP3P54108 245 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 GNA13Q14344 377 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 PON3Q15166 354 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 MAPK11Q15759 364 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 PDSS1Q5T2R2 415 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 PPP4R4Q6NUP7 873 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 ESPNLQ6ZVH7 1005 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 MSRB3Q8IXL7 192 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 PEX5LQ8IYB4 626 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 ACBD4Q8NC06 268 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 ATP6V1C2Q8NEY4 427 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 FNDC9Q8TBE3 224 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 ZNF524Q96C55 264 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 LRRC46Q96FV0 321 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 DOCK7Q96N67 2140 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 SFXN3Q9BWM7 321 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 PRRG4Q9BZD6 226 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 PAQR5Q9NXK6 330 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 LEF1Q9UJU2 399 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 NDUFAF1Q9Y375 327 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 ZNF175Q9Y473 711 aa16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 INTS1Q8N201 2190 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-206ENST00000409141 ITPR2Q14571 2701 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 A0A0J9YW62 118 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 SYT5O00445 386 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 TNFSF11O14788 317 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 ADAMDEC1O15204 470 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 CXCL13O43927 109 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 DNAJA2O60884 412 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 BCAS1O75363 584 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 NUDT7P0C024 238 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 PPIBP23284 216 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 UQCRC1P31930 480 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 SFTPDP35247 375 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 ASCL1P50553 236 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 EEF1A1P68104 462 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 FADDQ13158 208 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 CTU2Q2VPK5 515 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 SLC25A53Q5H9E4 307 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 EEF1A1P5Q5VTE0 462 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 HBMQ6B0K9 141 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 CGB2Q6NT52 195 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 CMIPQ8IY22 773 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 FAM71CQ8NEG0 241 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 OR10D3Q8NH80 312 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 OR2V1Q8NHB1 315 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 ZNF563Q8TA94 476 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 WDR60Q8WVS4 1066 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 TMEM234Q8WY98 164 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 CNOT9Q92600 299 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 TMEM19Q96HH6 336 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 ADGRG7Q96K78 797 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 KLHL15Q96M94 604 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 VAPAQ9P0L0 249 aa16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-206ENST00000409141 EEF1E1-BLOC1S5C9J1V9 151 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 ANGPT2O15123 496 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 EEF1E1O43324 174 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 CRHP06850 196 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 PRF1P14222 555 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 IGFBP2P18065 325 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 CARD18P57730 90 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 SESN3P58005 492 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 TMEM176BQ3YBM2 270 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 TSPEARQ8WU66 669 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 ST8SIA1Q92185 356 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 OSTF1Q92882 214 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 TREX2Q9BQ50 279 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 EXOSC3Q9NQT5 275 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 ACER3Q9NUN7 267 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 HCFC1P51610 2035 aa16.11■□□□□ 0.17
PDLIM2-206ENST00000409141 HEATR5AQ86XA9 2040 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 A0A0G2JPF8 293 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 A0A1W2PNV4 684 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 GJE1A6NN92 205 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 EVPLLA8MZ36 301 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 HNRNPCL2B2RXH8 293 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 HNRNPCL3B7ZW38 293 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 ETV2O00321 342 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 HNRNPCL1O60812 293 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 SYNGR4O95473 234 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 NTN1O95631 604 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 HNRNPCL4P0DMR1 293 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 FCGR2AP12318 317 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 RPS4Y1P22090 263 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 SLC6A8P48029 635 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms