RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	HOXB9	P17482	250 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MLLT11	Q13015	90 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	SCGB2A2	Q13296	93 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	LEXM	Q3ZCV2	418 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MRPL2	Q5T653	305 aa	Known RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TMEM150A	Q86TG1	271 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	C4orf36	Q96KX1	117 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	KAT6A	Q92794	2004 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	FUOM	A2VDF0	154 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	DNAJB6	O75190	326 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	DAP	P51397	102 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TMEM207	Q6UWW9	146 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	GSG1L	Q6UXU4	331 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	LILRA3	Q8N6C8	439 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	SCGB1C1	Q8TD33	95 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	NAT6	Q93015	286 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	HYLS1	Q96M11	299 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	AQP9	O43315	295 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CDKN3	Q16667	212 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	LSM14A	Q8ND56	463 aa	Known RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	BBS1	Q8NFJ9	593 aa		12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CCDC86	Q9H6F5	360 aa	Known RBP	12.44	□□□□□ -0.42
CACNA1C-222	ENST00000406454	SLC16A7	O60669	478 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	OR1D4	P47884	311 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	FASLG	P48023	281 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ANKRD54	Q6NXT1	300 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TMEFF1	Q8IYR6	380 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CD300LF	Q8TDQ1	290 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TMEM68	Q96MH6	324 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CXorf36	Q9H7Y0	433 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CACNA1S	Q13698	1873 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	KCNK5	O95279	499 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	GAST	P01350	101 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	PFN3	P60673	137 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	EGLN3	Q9H6Z9	239 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	GNG13	Q9P2W3	67 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TRBV11-1	A0A0K0K1C0	115 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	IFNA5	P01569	189 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	RAB3A	P20336	220 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	IGFBP6	P24592	240 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CSNK2A1	P68400	391 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MAT1A	Q00266	395 aa	Known RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TMEM31	Q5JXX7	168 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	PPP1R3B	Q86XI6	285 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	OR51Q1	Q8NH59	317 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	NPRL2	Q8WTW4	380 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TM4SF18	Q96CE8	201 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CDC6	Q99741	560 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TAS2R3	Q9NYW6	316 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CACNG2	Q9Y698	323 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	hCG_1807616	A0A1W2PRN6	198 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	NAP1L6	A6NFF2	107 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	BCAT2	O15382	392 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MPIG6B	O95866	241 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	UQCRC1	P31930	480 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	FUNDC1	Q8IVP5	155 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ASB12	Q8WXK4	309 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CDH20	Q9HBT6	801 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CLDN24	A6NM45	220 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	TMEM244	Q5VVB8	128 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	LIX1L	Q8IVB5	337 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CSNK2A3	Q8NEV1	391 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	SLC7A13	Q8TCU3	470 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ASIC5	Q9NY37	505 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	RNF113B	Q8IZP6	322 aa	Known RBP	12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454	FAM86C1	Q9NVL1	165 aa		12.43	□□□□□ -0.42
CACNA1C-222	ENST00000406454		F5H5K5	113 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CRTAP	O75718	401 aa	Predicted RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MRPS10	P82664	201 aa	Known RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ACVR1	Q04771	509 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CCSMST1	Q4G0I0	132 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	C18orf63	Q68DL7	685 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	FAM111B	Q6SJ93	734 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	USP51	Q70EK9	711 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	OR51T1	Q8NGJ9	327 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CDC14C	A4D256	554 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ITGBL1	O95965	494 aa	Predicted RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	EN2	P19622	333 aa	Predicted RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CASP6	P55212	293 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	PTRH1	Q86Y79	214 aa	Known RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	PPIL3	Q9H2H8	161 aa	Known RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MYEF2	Q9P2K5	600 aa	Known RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ZFAND5	O76080	213 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	CSNK1A1	P48729	337 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	GPR50	Q13585	617 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	SPCS2	Q15005	226 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	SF3A2	Q15428	464 aa	Known RBP	12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	ITPKC	Q96DU7	683 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	KCNIP1	Q9NZI2	227 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	LRP5	O75197	1615 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	MYH11	P35749	1972 aa		12.42	□□□□□ -0.42
CACNA1C-222	ENST00000406454	NPPB	P16860	134 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms