RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 G3V4G9 280 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 PRKAB2O43741 272 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 CIB2O75838 187 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 NDUFB10O96000 172 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 IGHG4P01861 327 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RNF224P0DH78 156 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 NCK1P16333 377 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 PRKAR2BP31323 418 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 CDH5P33151 784 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR1D4P47884 311 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 EFNB2P52799 333 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 HADHBP55084 474 aaKnown RBP3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 CDH4P55283 916 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 PRMT2P55345 433 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RWDD2BP57060 319 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RIPK4P57078 832 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RND3P61587 244 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 LAGE3Q14657 143 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 CYP51A1Q16850 503 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 CTSL3PQ5NE16 218 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 ATL3Q6DD88 541 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 EMBQ6PCB8 327 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 APTXQ7Z2E3 356 aaKnown RBP3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 SERINC5Q86VE9 423 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 UBE2J2Q8N2K1 259 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 NECAB1Q8N987 351 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 MFSD9Q8NBP5 474 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR9K2Q8NGE7 335 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR9A4Q8NGU2 314 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RFESDQ8TAC1 157 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RAB3IL1Q8TBN0 382 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 SLC2A14Q8TDB8 520 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 NPRL2Q8WTW4 380 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 POM121L2Q96KW2 1035 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 CITED1Q99966 193 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 ROPN1BQ9BZX4 212 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 TUBB1Q9H4B7 451 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 GLIPR2Q9H4G4 154 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 EXOSC3Q9NQT5 275 aaKnown RBP3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 NUDT4Q9NZJ9 180 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RCOR3Q9P2K3 495 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 SEC14L3Q9UDX4 400 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 SCML2Q9UQR0 700 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RNF24Q9Y225 148 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 OARD1Q9Y530 152 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 TIMM10BQ9Y5J6 103 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 PGK1P00558 417 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 HPP00738 406 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 S100A6P06703 90 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ASGR1P07306 291 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZNF10P21506 573 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 RDXP35241 583 aaKnown RBP3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ETV5P41161 510 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 EPS15P42566 896 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 GNPDA1P46926 289 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 FNTAP49354 379 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 OTUD4Q01804 1114 aaKnown RBP3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZNF154Q13106 437 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 IL18R1Q13478 541 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 PEX6Q13608 980 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 SSX2Q16385 188 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 NDUFA9Q16795 377 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 SLC25A52Q3SY17 297 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 PDZK1Q5T2W1 519 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 BEND3Q5T5X7 828 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 PRAMEF5Q5TYX0 476 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 AADACL4Q5VUY2 407 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 PRAMEF6Q5VXH4 476 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZNF57Q68EA5 555 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR8G2PQ6IF36 304 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZNF613Q6PF04 617 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 DOK6Q6PKX4 331 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 CLEC4FQ8N1N0 589 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 DHRSXQ8N5I4 330 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 C4orf32Q8N8J7 132 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 IL1F10Q8WWZ1 152 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZNF599Q96NL3 588 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 RPRD1AQ96P16 312 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 OPRPNQ99935 248 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 BCL7BQ9BQE9 202 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 NIPSNAP3BQ9BS92 247 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 CHCHD5Q9BSY4 110 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 CHRDL1Q9BU40 450 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 VCX3BQ9H321 246 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZFP14Q9HCL3 533 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 TIMM22Q9Y584 194 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 ALG6Q9Y672 507 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 GAKO14976 1311 aa3.91□□□□□ -1.78
HMGB1P13-201ENST00000406019 PEG3Q9GZU2 1588 aa3.9□□□□□ -1.78
HMGB1P13-201ENST00000406019 USP6P35125 1406 aa3.9□□□□□ -1.78
HMGB1P13-201ENST00000406019 IGHV3OR16-10A0A075B7F0 116 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 TRABD2BA6NFA1 517 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 A8MXK9 166 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZW10O43264 779 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 N4BP1O75113 896 aaKnown RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 LRATO95237 230 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 TROVE2P10155 538 aaKnown RBP eCLIP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms