RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 OGFOD2Q6N063 350 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 DNAJC14Q6Y2X3 702 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 C16orf62Q7Z3J2 963 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SPATA19Q7Z5L4 167 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CDH24Q86UP0 819 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GGNQ86UU5 652 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 KIRREL3Q8IZU9 778 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GTPBP8Q8N3Z3 284 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 TMCO5AQ8N6Q1 288 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 ATP6V1C2Q8NEY4 427 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR9I1Q8NGQ6 314 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GOT1L1Q8NHS2 421 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 FBXO27Q8NI29 283 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PNPT1Q8TCS8 783 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 XAGE5Q8WWM1 108 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR52E6Q96RD3 313 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GPATCH1Q9BRR8 931 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC35A5Q9BS91 424 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SFXN3Q9BWM7 321 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 RBM24Q9BX46 236 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 OPN3Q9H1Y3 402 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLCO1B3Q9NPD5 702 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC6A13Q9NSD5 602 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GALNT8Q9NY28 637 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 JKAMPQ9P055 326 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 KCNN3Q9UGI6 736 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PACSIN3Q9UKS6 424 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 MKLN1Q9UL63 735 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 ICAM5Q9UMF0 924 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLEC4AQ9UMR7 237 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PCDHGB4Q9UN71 923 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 DTNAQ9Y4J8 743 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 FREM1Q5H8C1 2179 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 A0A087WZY1 265 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 SERINC4A6NH21 518 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 TUBAL3A6NHL2 446 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 CCDC154A6NI56 674 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLDN24A6NM45 220 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ENO4A6NNW6 628 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 LINC01387J3KSC0 135 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 HMGN4O00479 90 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 BCAS1O75363 584 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 UGT2B17O75795 530 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 PGRP06401 933 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 LINGO3P0C6S8 592 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 UBL4AP11441 157 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF17P17021 662 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 KIR2DL2P43627 348 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 KHKP50053 298 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 P2RX1P51575 399 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 EEFSECP57772 596 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 RPS3AP61247 264 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 CHRNEQ04844 493 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 FAM27E3Q08E93 113 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 SKP2Q13309 424 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 POU4F3Q15319 338 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 SYPL1Q16563 259 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 DPY19L1Q2PZI1 675 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 CTU2Q2VPK5 515 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ARHGAP11BQ3KRB8 267 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 GTDC1Q4AE62 458 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 COX20Q5RI15 118 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 TYW3Q6IPR3 259 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 HEPHL1Q6MZM0 1159 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 BHLHB9Q6PI77 547 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF474Q6S9Z5 364 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 FRRS1Q6ZNA5 592 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF621Q6ZSS3 439 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 RNF130Q86XS8 419 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 MISPQ8IVT2 679 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 LRRC34Q8IZ02 419 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 LILRA2Q8N149 483 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 METTL25Q8N6Q8 603 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ANKFN1Q8N957 763 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF527Q8NB42 609 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 CHDHQ8NE62 594 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 VPS37AQ8NEZ2 397 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR10D3Q8NH80 312 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR2V1Q8NHB1 315 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 RAB3IL1Q8TBN0 382 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 PIWIL2Q8TC59 973 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 MIPOL1Q8TD10 442 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 GPR119Q8TDV5 335 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ACTRT2Q8TDY3 377 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZBTB8AQ96BR9 441 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ROPN1LQ96C74 230 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZG16BQ96DA0 208 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 STARD4Q96DR4 205 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 NEURL3Q96EH8 262 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 LRRC46Q96FV0 321 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 AURKBQ96GD4 344 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 MAELQ96JY0 434 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ADGRG7Q96K78 797 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ATP6V1G3Q96LB4 118 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 KLHL15Q96M94 604 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZFP3Q96NJ6 502 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 CCDC115Q96NT0 180 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 PANX1Q96RD7 426 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 THUMPD3Q9BV44 507 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 SSBP4Q9BWG4 385 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms