RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 IMPA2O14732 288 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 NUPL2O15504 423 aaKnown RBP12.9□□□□□ -0.34
VAPA-202ENST00000400000 SCAF4O95104 1147 aaKnown RBP12.9□□□□□ -0.34
VAPA-202ENST00000400000 PTGER4P35408 488 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 OR1D5P58170 312 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 RNF4P78317 190 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 PRAMEF9Q5VWM5 478 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 NDUFAF7Q7L592 441 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 FBXO27Q8NI29 283 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 SFXN5Q8TD22 340 aa12.9□□□□□ -0.34
VAPA-202ENST00000400000 NME4O00746 187 aa12.9□□□□□ -0.35
VAPA-202ENST00000400000 NDUFB2O95178 105 aa12.9□□□□□ -0.35
VAPA-202ENST00000400000 TSFMP43897 325 aaKnown RBP12.9□□□□□ -0.35
VAPA-202ENST00000400000 OR1J4Q8NGS1 313 aa12.9□□□□□ -0.35
VAPA-202ENST00000400000 HAS2Q92819 552 aa12.9□□□□□ -0.35
VAPA-202ENST00000400000 PFDN5Q99471 154 aa12.9□□□□□ -0.35
VAPA-202ENST00000400000 POM121CA8CG34 1229 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 MRPL33O75394 65 aaKnown RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 SLC22A5O76082 557 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 GNB1P62873 340 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 OR5AS1Q8N127 324 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 LMO3Q8TAP4 145 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 ZNF443Q9Y2A4 671 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 GRPP07492 148 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 RRAS2P62070 204 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 SGPP2Q8IWX5 399 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 OR4F15Q8NGB8 312 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 MUCL1Q96DR8 90 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 INIPQ9NRY2 104 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 TEX10Q9NXF1 929 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 PLEKHM1Q9Y4G2 1056 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 ABCC6O95255 1503 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 URB1O60287 2271 aaKnown RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 ANKRD33BA6NCL7 494 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 ANTXRLA6NF34 631 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 F8W036 122 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 RRP8O43159 456 aaKnown RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 DDCP20711 480 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 CDK2P24941 298 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 TGM4P49221 684 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 BLOC1S1P78537 153 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 EIF4HQ15056 248 aaKnown RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 CCBE1Q6UXH8 406 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 PDZD3Q86UT5 571 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 TPRA1Q86W33 373 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 GTPBP8Q8N3Z3 284 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 PDCD1LG2Q9BQ51 273 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 TM7SF3Q9NS93 570 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 CBLCQ9ULV8 474 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 IFNA4P05014 189 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 RPS2P15880 293 aaKnown RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 IDH3GP51553 393 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 CLDN12P56749 244 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 AGAP7PQ5VUJ5 663 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 AGAP6Q5VW22 663 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 STEAP4Q687X5 459 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 AGAP4Q96P64 663 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 RANBP9Q96S59 729 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 SYT3Q9BQG1 590 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 CUTCQ9NTM9 273 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 MROH6A6NGR9 719 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 SSX4O60224 188 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 CD46P15529 392 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 HTR2AP28223 471 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 ILKQ13418 452 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 ALKBH6Q3KRA9 238 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 MRPL43Q8N983 215 aaKnown RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 ST7LQ8TDW4 575 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 TMIGD2Q96BF3 282 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 VRK1Q99986 396 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 TSPAN10Q9H1Z9 355 aaPredicted RBP12.89□□□□□ -0.35
VAPA-202ENST00000400000 MMP27Q9H306 513 aa12.89□□□□□ -0.35
VAPA-202ENST00000400000 SHISA7A6NL88 538 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 SUSD5O60279 629 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 RAB3DO95716 219 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 NFYBP25208 207 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 CCR7P32248 378 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 KCNAB1Q14722 419 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 C2orf76Q3KRA6 126 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 CNIH2Q6PI25 160 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 CCDC71LQ8N9Z2 235 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 TAAR8Q969N4 342 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 RSPRY1Q96DX4 576 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ULBP2Q9BZM5 246 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 PCDHA9Q9Y5H5 950 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 AQP7O14520 342 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 OSMP13725 252 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 IDUAP35475 653 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 DLSTP36957 453 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms