RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 IL1AP01583 271 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 HERV-K104P61576 105 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 MAT1AQ00266 395 aaKnown RBP13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 SPCS2Q15005 226 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC6A19Q695T7 634 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 FIP1L1Q6UN15 594 aaKnown RBP13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 MBOAT2Q6ZWT7 520 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR6T1Q8NGN1 323 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR6Q1Q8NGQ2 317 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR14A16Q8NHC5 309 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 FAM46BQ96A09 425 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF578Q96N58 590 aaPredicted RBP13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR52A5Q9H2C5 316 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 C13orf42A0A1B0GVH6 325 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 GYPBP06028 91 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 FXYD6P3P58550 94 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF704Q6ZNC4 412 aaPredicted RBP13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR4F15Q8NGB8 312 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 RHOXF1Q8NHV9 184 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 RHBDD1Q8TEB9 315 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 SGCDQ92629 289 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 AMBRA1Q9C0C7 1298 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 ANKRD19PQ9H560 264 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR51B4Q9Y5P0 310 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 POM121BA6NF01 834 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 TLCD2A6NGC4 264 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 VSTM5A8MXK1 200 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 CTNSO60931 367 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 SFTPDP35247 375 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 FOLR3P41439 243 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 RACK1P63244 317 aaKnown RBP13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 MRPL49Q13405 166 aaKnown RBP13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 ABHD17BQ5VST6 288 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 MAP3K3Q99759 626 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 KLHL9Q9P2J3 617 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 ACTBP60709 375 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 VAMP2P63027 116 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 ACTG1P63261 375 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 ZNF615Q8N8J6 731 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 SLC16A11Q8NCK7 471 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR13C2Q8NGS9 318 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR14L1PQ8NHC6 308 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 LINC00615Q96LM1 132 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 SLC6A15Q9H2J7 730 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 SIDT1Q9NXL6 827 aaKnown RBP13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 PTRH2Q9Y3E5 179 aaKnown RBP13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 KLK4Q9Y5K2 254 aa13.27□□□□□ -0.29
PCDHGA11-201ENST00000398587 CTSLP07711 333 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 CD27P26842 260 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 SLC19A1P41440 591 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 ALDH3B2P48448 385 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 HES5Q5TA89 166 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 TBPL2Q6SJ96 375 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 KCTD9Q7L273 389 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 ENTHD1Q8IYW4 607 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 ITPKCQ96DU7 683 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 NIPSNAP1Q9BPW8 284 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 LYRM4Q9HD34 91 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 SACM1LQ9NTJ5 587 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 A0A1B0GTL3 188 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 BOLA2-SMG1P6H3BVE0 249 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 HSPA12AO43301 675 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 LYRM1O43325 122 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 TPD52L2O43399 206 aaKnown RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 GALR3O60755 368 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 CD63P08962 238 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 PIGAP37287 484 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 OPRD1P41143 372 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 AFF3P51826 1226 aaKnown RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 PTCRAQ6ISU1 281 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 NLGN4XQ8N0W4 816 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 SPERTQ8NA61 448 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 RPL3LQ92901 407 aaKnown RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 C4orf36Q96KX1 117 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR5B2Q96R09 309 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 AK6Q9Y3D8 172 aaKnown RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 FUOMA2VDF0 154 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 SERINC4A6NH21 518 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 PITPNBP48739 271 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 RNASE10Q5GAN6 216 aaKnown RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 C3orf38Q5JPI3 329 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 SPIN3Q5JUX0 258 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 ZNF322Q6U7Q0 402 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 NEDD4LQ96PU5 975 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR10A5Q9H207 317 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 RANBP3Q9H6Z4 567 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 TMEM185BQ9H7F4 350 aa13.26□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR5K3A6NET4 321 aa13.25□□□□□ -0.29
PCDHGA11-201ENST00000398587 TVP23AA6NH52 213 aa13.25□□□□□ -0.29
PCDHGA11-201ENST00000398587 C1QAP02745 245 aa13.25□□□□□ -0.29
PCDHGA11-201ENST00000398587 DNASE1P24855 282 aa13.25□□□□□ -0.29
PCDHGA11-201ENST00000398587 RBMXP38159 391 aaKnown RBP13.25□□□□□ -0.29
PCDHGA11-201ENST00000398587 ZNF81P51508 661 aa13.25□□□□□ -0.29
PCDHGA11-201ENST00000398587 DUSP7Q16829 419 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms