RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CNIH3Q8TBE1 160 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 FAF2Q96CS3 445 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 SH3YL1Q96HL8 342 aaPredicted RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 CELF6Q96J87 481 aaKnown RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 TGM7Q96PF1 710 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 OR5B2Q96R09 309 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 OR5M11Q96RB7 305 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 KIR2DL4Q99706 377 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 TUBGCP2Q9BSJ2 902 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 PNNQ9H307 717 aaKnown RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 SMYD3Q9H7B4 428 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 CAB39LQ9H9S4 337 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 APMAPQ9HDC9 416 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 NUDT15Q9NV35 164 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 SMPD3Q9NY59 655 aaPredicted RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 APOBEC3BQ9UH17 382 aaKnown RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 PCSK1NQ9UHG2 260 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 RPH3ALQ9UNE2 315 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ERVW-1Q9UQF0 538 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 CA5BQ9Y2D0 317 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ADAMTS9Q9P2N4 1935 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 IGLV8-61A0A075B6I0 122 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 H3BMQ9 156 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 PRRG1O14668 218 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 PHOX2AO14813 284 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 PRKAB2O43741 272 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 TPST2O60704 377 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 ECI2O75521 394 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 GPX5O75715 221 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 CA1P00915 261 aaPredicted RBP2.01□□□□□ -2.09
CD47-203ENST00000398258 SEMG1P04279 462 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 UGT2B4P06133 528 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 P0C879 139 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 IGLL1P15814 213 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 PTBP1P26599 531 aaKnown RBP eCLIP2.01□□□□□ -2.09
CD47-203ENST00000398258 LAP3P28838 519 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 HPCAL1P37235 193 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 RPL29P47914 159 aaKnown RBP2.01□□□□□ -2.09
CD47-203ENST00000398258 NUCB2P80303 420 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 OTUD4Q01804 1114 aaKnown RBP2.01□□□□□ -2.09
CD47-203ENST00000398258 C1orf61Q13536 156 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 MXD4Q14582 209 aaPredicted RBP2.01□□□□□ -2.09
CD47-203ENST00000398258 OR2B11Q5JQS5 317 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 TMEM225Q6GV28 225 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 OR5M10Q6IEU7 315 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 CASC1Q6TDU7 716 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 VITQ6UXI7 678 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 C16orf62Q7Z3J2 963 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 KIAA1328Q86T90 577 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 APOBEC3FQ8IUX4 373 aaKnown RBP2.01□□□□□ -2.09
CD47-203ENST00000398258 ZNF679Q8IYX0 411 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 LRRC75A-AS1Q8N1F1 130 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 SVOPLQ8N434 492 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 FBXL16Q8N461 479 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 KIR3DL3Q8N743 410 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 CATSPER1Q8NEC5 780 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 OR2T33Q8NG76 320 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 OR2A12Q8NGT7 310 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 OR1F12Q8NHA8 337 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 HAVCR1Q96D42 359 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 FAM122AQ96E09 287 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 TTC25Q96NG3 672 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 PSKH2Q96QS6 385 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 CCNL2Q96S94 520 aaPredicted RBP2.01□□□□□ -2.09
CD47-203ENST00000398258 SLC35A5Q9BS91 424 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 PARD6BQ9BYG5 372 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 SRXN1Q9BYN0 137 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 DEFB126Q9BYW3 111 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 RHBGQ9H310 441 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 UFSP2Q9NUQ7 469 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 RSPH14Q9UHP6 348 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 TP53TG3Q9ULZ0 132 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 MOKQ9UQ07 419 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 POLDIP2Q9Y2S7 368 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 FLVCR1Q9Y5Y0 555 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 ATP10AO60312 1499 aa2.01□□□□□ -2.09
CD47-203ENST00000398258 TRAV26-1A0A087WT03 109 aa2□□□□□ -2.09
CD47-203ENST00000398258 G3V4G9 280 aa2□□□□□ -2.09
CD47-203ENST00000398258 RS1O15537 224 aa2□□□□□ -2.09
CD47-203ENST00000398258 SERF1AO75920 110 aa2□□□□□ -2.09
CD47-203ENST00000398258 IGHV3-23P01764 117 aa2□□□□□ -2.09
CD47-203ENST00000398258 PNMTP11086 282 aa2□□□□□ -2.09
CD47-203ENST00000398258 ADORA2BP29275 332 aa2□□□□□ -2.09
CD47-203ENST00000398258 TDO2P48775 406 aa2□□□□□ -2.09
CD47-203ENST00000398258 CASP4P49662 377 aa2□□□□□ -2.09
CD47-203ENST00000398258 SERTAD2Q14140 314 aa2□□□□□ -2.09
CD47-203ENST00000398258 ELAVL3Q14576 367 aaKnown RBP2□□□□□ -2.09
CD47-203ENST00000398258 KIAA0040Q15053 153 aa2□□□□□ -2.09
CD47-203ENST00000398258 GSG1Q2KHT4 349 aa2□□□□□ -2.09
CD47-203ENST00000398258 EXOC3L2Q2M3D2 409 aa2□□□□□ -2.09
CD47-203ENST00000398258 SLC25A52Q3SY17 297 aa2□□□□□ -2.09
CD47-203ENST00000398258 CEP55Q53EZ4 464 aa2□□□□□ -2.09
CD47-203ENST00000398258 PRR30Q53SZ7 412 aaPredicted RBP2□□□□□ -2.09
CD47-203ENST00000398258 SFT2D3Q587I9 215 aa2□□□□□ -2.09
CD47-203ENST00000398258 C1orf220Q5T0J3 134 aa2□□□□□ -2.09
CD47-203ENST00000398258 BEND3Q5T5X7 828 aa2□□□□□ -2.09
CD47-203ENST00000398258 LIPNQ5VXI9 398 aa2□□□□□ -2.09
CD47-203ENST00000398258 KDELC1Q6UW63 502 aa2□□□□□ -2.09
CD47-203ENST00000398258 RGS9BPQ6ZS82 235 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms