RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 SYPP08247 313 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 HCKP08631 526 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TCN2P20062 427 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 PGCP20142 388 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 CSRP3P50461 194 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 DUSP3P51452 185 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 CLDN6P56747 220 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 CLRN1P58418 232 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 ZNF91Q05481 1191 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 MELKQ14680 651 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 HES5Q5TA89 166 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 LCN1P1Q5VSP4 162 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 MSRB3Q8IXL7 192 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TNFAIP8L1Q8WVP5 186 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 KIAA1143Q96AT1 154 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 HS6ST2Q96MM7 605 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 PITX2Q99697 317 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TUBA1CQ9BQE3 449 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 ORAI3Q9BRQ5 295 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 EMC6Q9BV81 110 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 KATNB1Q9BVA0 655 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 EXTL2Q9UBQ6 330 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 AP1M2Q9Y6Q5 423 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SPTY2D1-AS1A0A0U1RR47 76 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 IRGMA1A4Y4 181 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 F5H5K5 113 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 UBL4AP11441 157 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 MAKP20794 623 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 OPRL1P41146 370 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SMAD4Q13485 552 aaKnown RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 GLYR1Q49A26 553 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 C14orf28Q4W4Y0 310 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 MFSD12Q6NUT3 480 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TP53I13Q8NBR0 393 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 ZNF578Q96N58 590 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 NMNAT3Q96T66 252 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TEX101Q9BY14 249 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 ARRDC1-AS1Q9H2J1 176 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TMEM165Q9HC07 324 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SLAMF7Q9NQ25 335 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 FBXO34Q9NWN3 711 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 MED11Q9P086 117 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 CACNA1AO00555 2505 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 A6NCN8 305 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 NPIPA2E9PIF3 369 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 NPIPA3F8WFD2 350 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SLC16A7O60669 478 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 CPNE6O95741 557 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 ZNF20P17024 532 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 CLDN12P56749 244 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 POU3F1Q03052 451 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 SCRN3Q0VDG4 424 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 CRMP1Q14194 572 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 KIAA0040Q15053 153 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.37□□□□□ -0.75
IFT140-202ENST00000397417 PROX2Q3B8N5 592 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SLC6A19Q695T7 634 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TCEAL6Q6IPX3 200 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 PRICKLE2Q7Z3G6 844 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 PTOV1Q86YD1 416 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 LRRC17Q8N6Y2 441 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SPRYD4Q8WW59 207 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 ACOT11Q8WXI4 607 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 TCEAL3Q969E4 200 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TCTN2Q96GX1 697 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 PRRC1Q96M27 445 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 TSSK2Q96PF2 358 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SEMA6CQ9H3T2 930 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 C1GALT1Q9NS00 363 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 ACSS1Q9NUB1 689 aaPredicted RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 LAMA2P24043 3122 aaKnown RBP10.37□□□□□ -0.75
IFT140-202ENST00000397417 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 SPG11Q96JI7 2443 aa10.37□□□□□ -0.75
IFT140-202ENST00000397417 A0A1B0GWA3 101 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 ZNF670-ZNF695F2Z2N8 137 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 TP53I11O14683 189 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 TOXO94900 526 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 PGAM2P15259 253 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 MMP11P24347 488 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 TACR3P29371 465 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 SPCS2Q15005 226 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 MAPK14Q16539 360 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 HDDC2Q7Z4H3 204 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 RBM12BQ8IXT5 1001 aaKnown RBP10.36□□□□□ -0.75
IFT140-202ENST00000397417 C9orf43Q8TAL5 461 aaPredicted RBP10.36□□□□□ -0.75
IFT140-202ENST00000397417 THAP4Q8WY91 577 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 GGHQ92820 318 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 TMEM41AQ96HV5 264 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 MROQ9BYG7 248 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 VSX1Q9NZR4 365 aaPredicted RBP10.36□□□□□ -0.75
IFT140-202ENST00000397417 CLEC1BQ9P126 229 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
IFT140-202ENST00000397417 ADAM18Q9Y3Q7 739 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 MTCH2Q9Y6C9 303 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 UPK1AO00322 258 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 GGT2P36268 569 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 TUBA3CQ13748 450 aa10.36□□□□□ -0.75
IFT140-202ENST00000397417 SERTAD2Q14140 314 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms