RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 MRPL57Q9BQC6 102 aaKnown RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 EBPLQ9BY08 206 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 BPESC1Q9GZL8 116 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 MRPL46Q9H2W6 279 aaKnown RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 CXorf36Q9H7Y0 433 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 MIEF1Q9NQG6 463 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 UBQLN4Q9NRR5 601 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 WBP11Q9Y2W2 641 aaKnown RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 SAR1BQ9Y6B6 198 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 PMF1-BGLAPU3KQ54 211 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 LOC390937A0A1W2PQ73 354 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF724A8MTY0 619 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF195O14628 629 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 CYTIPO60759 359 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 KCNK2O95069 426 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 SBK3P0C264 359 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 PRPS2P11908 318 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 HPGDP15428 266 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 ENPP1P22413 925 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 EDNRAP25101 427 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 APEX1P27695 318 aaKnown RBP8.26□□□□□ -1.09
NEDD9-203ENST00000397378 HMOX2P30519 316 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 PRIM2P49643 509 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 HTR6P50406 440 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 SUMO3P55854 103 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-203ENST00000397378 CHRNB3Q05901 458 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 SPOCK1Q08629 439 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 RASGEF1BQ0VAM2 473 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 FOXL1Q12952 345 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 TRADDQ15628 312 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 UAP1Q16222 522 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-203ENST00000397378 TMEM176BQ3YBM2 270 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-203ENST00000397378 FBLN7Q53RD9 439 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 THSD4Q6ZMP0 1018 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 DEF8Q6ZN54 512 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 GPRIN3Q6ZVF9 776 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 MTERF4Q7Z6M4 381 aaKnown RBP8.26□□□□□ -1.09
NEDD9-203ENST00000397378 ZAR1Q86SH2 424 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 SVOPLQ8N434 492 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 TMEM151AQ8N4L1 468 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 CDRT4Q8N9R6 151 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 CEP70Q8NHQ1 597 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 METTL6Q8TCB7 284 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF75CPQ92670 426 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-203ENST00000397378 INPP5KQ9BT40 448 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 TRMOQ9BU70 441 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 MYNNQ9NPC7 610 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 EQTNQ9NQ60 294 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 NTMQ9P121 344 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 ACTL7BQ9Y614 415 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 SLC25A15Q9Y619 301 aa8.26□□□□□ -1.09
NEDD9-203ENST00000397378 GPC6Q9Y625 555 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-203ENST00000397378 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 SCDO00767 359 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 RAD51CO43502 376 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 SUPT7LO94864 414 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 HSPA4LO95757 839 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ENO1P06733 434 aaKnown RBP8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ARAFP10398 606 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 IL2RGP31785 369 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 APOBEC3AP31941 199 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF83P51522 516 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ARFIP2P53365 341 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 BTKQ06187 659 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 SELENBP1Q13228 472 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 CD226Q15762 336 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 UNC50Q53HI1 259 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF678Q5SXM1 525 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 FBXW9Q5XUX1 488 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 USP43Q70EL4 1123 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF551Q7Z340 670 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF540Q8NDQ6 660 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 NUP43Q8NFH3 380 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 OR52N5Q8NH56 324 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 FAM76AQ8TAV0 307 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 GIMAP5Q96F15 307 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 MRGPRX4Q96LA9 322 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF300Q96RE9 604 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-203ENST00000397378 MYOZ1Q9NP98 299 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-203ENST00000397378 MED29Q9NX70 200 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 STK38LQ9Y2H1 464 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 PTGDR2Q9Y5Y4 395 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 RYR3Q15413 4870 aa8.25□□□□□ -1.09
NEDD9-203ENST00000397378 WNK1Q9H4A3 2382 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 IGHV3-15A0A0B4J1V0 119 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 CCDC151A5D8V7 595 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 RAD51DO75771 328 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ACP2P11117 423 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 PRKCAP17252 672 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 SLC7A1P30825 629 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 SERPINB4P48594 390 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 P2RX1P51575 399 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 CHN2P52757 468 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 DVL1P1P54792 670 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-203ENST00000397378 CDH15P55291 814 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF117Q03924 483 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 HSPB3Q12988 150 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 SLC25A53Q5H9E4 307 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms