RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 A0A1B0GX12 115 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 TRAPPC13A5PLN9 417 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 ANKUB1A6NFN9 424 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 TNFRSF11BO00300 401 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 GADD45GO95257 159 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 LINGO3P0C6S8 592 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 ENDOUP21128 410 aaKnown RBP12.83□□□□□ -0.36
GAPDH-203ENST00000396858 IDH2P48735 452 aaKnown RBP12.83□□□□□ -0.36
GAPDH-203ENST00000396858 CD97P48960 835 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 CBFBQ13951 182 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 QPRTQ15274 297 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 SNCBQ16143 134 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 LPCAT4Q643R3 524 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 GDF7Q7Z4P5 450 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 TMEM179BQ7Z7N9 219 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 FADS6Q8N9I5 356 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 PIK3C3Q8NEB9 887 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 OR4C15Q8NGM1 316 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 ZNF563Q8TA94 476 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 RNF217Q8TC41 542 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 NRG4Q8WWG1 115 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 NTNG2Q96CW9 530 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 CRELD1Q96HD1 420 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 C5orf34Q96MH7 638 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 SMAD5Q99717 465 aaKnown RBP12.83□□□□□ -0.36
GAPDH-203ENST00000396858 BARD1Q99728 777 aaKnown RBP12.83□□□□□ -0.36
GAPDH-203ENST00000396858 CIB1Q99828 191 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 FNDC11Q9BVV2 318 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 TRIM2Q9C040 744 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.83□□□□□ -0.36
GAPDH-203ENST00000396858 DSN1Q9H410 356 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 SDHAF3Q9NRP4 125 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 TUBA8Q9NY65 449 aaPredicted RBP12.83□□□□□ -0.36
GAPDH-203ENST00000396858 RPS6KB2Q9UBS0 482 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 OAZ3Q9UMX2 235 aa12.83□□□□□ -0.36
GAPDH-203ENST00000396858 ANKRD11Q6UB99 2663 aaPredicted RBP12.82□□□□□ -0.36
GAPDH-203ENST00000396858 ANKRD33BA6NCL7 494 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 NME2P1O60361 137 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 LYPD3O95274 346 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 PDGFAP04085 211 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 UQCRBP14927 111 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 PGCP20142 388 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 FPR1P21462 350 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 NME2P22392 152 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 ELAVL4P26378 380 aaKnown RBP12.82□□□□□ -0.36
GAPDH-203ENST00000396858 COPZ1P61923 177 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 FOXK2Q01167 660 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 FOXF1Q12946 379 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 TBR1Q16650 682 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 LRRC36Q1X8D7 754 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 COLEC12Q5KU26 742 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 IGFL2Q6UWQ7 119 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 ARSKQ6UWY0 536 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 WDR88Q6ZMY6 472 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 PLCZ1Q86YW0 608 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 WDSUB1Q8N9V3 476 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 CATSPER1Q8NEC5 780 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 EXTL1Q92935 676 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 C3orf49Q96BT1 292 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 TMEM41AQ96HV5 264 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 FRMD6Q96NE9 622 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 EPYCQ99645 322 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 BDH2Q9BUT1 245 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 POLR2J2Q9GZM3 115 aaKnown RBP12.82□□□□□ -0.36
GAPDH-203ENST00000396858 POLR2J3Q9H1A7 115 aaKnown RBP12.82□□□□□ -0.36
GAPDH-203ENST00000396858 NMNAT1Q9HAN9 279 aaPredicted RBP12.82□□□□□ -0.36
GAPDH-203ENST00000396858 TMEM27Q9HBJ8 222 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 MED17Q9NVC6 651 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 TAS2R10Q9NYW0 307 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 VDAC3Q9Y277 283 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 MAGED1Q9Y5V3 778 aaPredicted RBP12.82□□□□□ -0.36
GAPDH-203ENST00000396858 PTPRQQ9UMZ3 2332 aa12.82□□□□□ -0.36
GAPDH-203ENST00000396858 DMXL2Q8TDJ6 3036 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 URB1O60287 2271 aaKnown RBP12.81□□□□□ -0.36
GAPDH-203ENST00000396858 TMEM8BA6NDV4 472 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 SHISA8B8ZZ34 492 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 PDLIM1O00151 329 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 FAAHO00519 579 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 CASQ2O14958 399 aaPredicted RBP12.81□□□□□ -0.36
GAPDH-203ENST00000396858 CHP2O43745 196 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 PIP5K1CO60331 668 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 DPM1O60762 260 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 TRIM3O75382 744 aaPredicted RBP12.81□□□□□ -0.36
GAPDH-203ENST00000396858 SNX4O95219 450 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 WISP1O95388 367 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 SP1P08047 785 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 RFC3P40938 356 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 LIMS1P48059 325 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 TNFSF10P50591 281 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 ZNF41P51814 821 aaPredicted RBP12.81□□□□□ -0.36
GAPDH-203ENST00000396858 TRAM2Q15035 370 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 SEC23BQ15437 767 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 ZNF766Q5HY98 468 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 ALG10BQ5I7T1 473 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 WBP2NLQ6ICG8 309 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 ZNF613Q6PF04 617 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 POMZP3Q6PJE2 187 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 GALNTL5Q7Z4T8 443 aa12.81□□□□□ -0.36
GAPDH-203ENST00000396858 PACS2Q86VP3 889 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms