RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 TREML1Q86YW5 311 aa16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 LACC1Q8IV20 430 aa16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 PCYOX1LQ8NBM8 494 aa16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 NFKBIDQ8NI38 313 aa16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 CNOT9Q92600 299 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 TUBA1CQ9BQE3 449 aa16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 SLC39A3Q9BRY0 314 aa16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 NANOGQ9H9S0 305 aa16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 SPTBN1Q01082 2364 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-204ENST00000396542 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 CDHR4A6H8M9 788 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 C5orf58C9J3I9 102 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 H0Y3Z8 333 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 ADAM11O75078 769 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 CYP7B1O75881 506 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 COX4I1P13073 169 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 ETS2P15036 469 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 ELK4P28324 431 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 CCR4P51679 360 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 SUCLG1P53597 346 aaKnown RBP16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 CLDN20P56880 219 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 RAC1P63000 192 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 SRYQ05066 204 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 RBBP4Q09028 425 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 QPRTQ15274 297 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 ZSWIM7Q19AV6 140 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 LIN52Q52LA3 116 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 RIPPLY2Q5TAB7 128 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 ZNF836Q6ZNA1 936 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 SERPINA11Q86U17 422 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 VRK2Q86Y07 508 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 GRAMD2AQ8IUY3 354 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 MEIOBQ8N635 442 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 POU5F2Q8N7G0 328 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 OR8J3Q8NGG0 315 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 ST8SIA1Q92185 356 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 RND1Q92730 232 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 RCN3Q96D15 328 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 MRGPRX4Q96LA9 322 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 CALHM2Q9HA72 323 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 RNF6Q9Y252 685 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 ZNF443Q9Y2A4 671 aaPredicted RBP16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 IFT52Q9Y366 437 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 CHST2Q9Y4C5 530 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 HECTD1Q9ULT8 2610 aa16.03■□□□□ 0.16
TNFSF13-204ENST00000396542 MBD3L4A6NDZ8 208 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 MBD3L3A6NE82 208 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 MBD3L5A6NJ08 208 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 EFNA2O43921 213 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 SHOX2O60902 331 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 TOXO94900 526 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 CLDN1O95832 211 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 PABPC4LP0CB38 370 aaKnown RBP16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 PGCP20142 388 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 IL11P20809 199 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 TIMP3P35625 211 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 SLC6A8P48029 635 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 GZMMP51124 257 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 SCARB2Q14108 478 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 CDSNQ15517 529 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 RABL3Q5HYI8 236 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 MBD3L2Q8NHZ7 208 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 FBXO27Q8NI29 283 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 DOCK7Q96N67 2140 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 TRIB1Q96RU8 372 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 SH3GL1Q99961 368 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 SPATA9Q9BWV2 254 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 RSPO3Q9BXY4 272 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 GID8Q9NWU2 228 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 COQ3Q9NZJ6 369 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 CLCF1Q9UBD9 225 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 STOML1Q9UBI4 398 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 ARL2BPQ9Y2Y0 163 aa16.02■□□□□ 0.16
TNFSF13-204ENST00000396542 ICE1Q9Y2F5 2266 aa16.02■□□□□ 0.15
TNFSF13-204ENST00000396542 A0A0G2JNJ9 132 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 CLCA1A8K7I4 914 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 H0YC42 278 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 FAAHO00519 579 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 SLC6A2P23975 617 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 CHRNB4P30926 498 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 CEACAM8P31997 349 aaPredicted RBP16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 TPD52P55327 224 aaPredicted RBP16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 PCBP3P57721 371 aaKnown RBP16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 EEFSECP57772 596 aaKnown RBP16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 SESN3P58005 492 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 ART3Q13508 389 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 LARS2Q15031 903 aaKnown RBP16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 CYP51A1Q16850 503 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 CTU2Q2VPK5 515 aaKnown RBP16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 CALHM3Q86XJ0 350 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 ZZZ3Q8IYH5 903 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 UBQLNLQ8IYU4 475 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 C11orf65Q8NCR3 313 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 HIPK4Q8NE63 616 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 OR10A6Q8NH74 314 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 TMEM234Q8WY98 164 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 ADGRG7Q96K78 797 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 CCT8L2Q96SF2 557 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 ACER3Q9NUN7 267 aa16.01■□□□□ 0.15
TNFSF13-204ENST00000396542 RLIMQ9NVW2 624 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms