RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 OR5T1Q8NG75 326 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 OR52I1Q8NGK6 324 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 OR1B1Q8NGR6 318 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 TCP10LQ8TDR4 215 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 PIGTQ969N2 578 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 NXPE2Q96DL1 559 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 CSPG4P5Q96PW8 444 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 SLC6A7Q99884 636 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 ALG9Q9H6U8 611 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 WDR55Q9H6Y2 383 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 EGLN3Q9H6Z9 239 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 SLC38A10Q9HBR0 1119 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 SLC25A19Q9HC21 320 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 S100A14Q9HCY8 104 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 NANSQ9NR45 359 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 THSD1Q9NS62 852 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 KLRF1Q9NZS2 232 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 POLKQ9UBT6 870 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 MMP24Q9Y5R2 645 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 R4GN57 208 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 URGCP-MRPS24S4R325 110 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 CFTRP13569 1480 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 TRBV5-5A0A0J9YX44 114 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 RNASEK-C17orf49H0YIS7 233 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 KLRC4-KLRK1H3BQV0 150 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 CASKO14936 926 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 RAD51BO15315 384 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 SNAI2O43623 268 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 HUS1O60921 280 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 TOXO94900 526 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 OAZ2O95190 189 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 TSPAN13O95857 204 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 F10P00742 488 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 ATP1B1P05026 303 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 H2BFMP0C1H6 154 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 MYL2P10916 166 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 MBL2P11226 248 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 IMPDH1P20839 514 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 BCKDHBP21953 392 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 UGT1A4P22310 534 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 GNLYP22749 145 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 UGT2B10P36537 528 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 RPL3P39023 403 aaKnown RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 SLC26A3P40879 764 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 GNPDA1P46926 289 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 RFX3P48380 749 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 POLR2GP62487 172 aaKnown RBP eCLIP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 EEF1A1P68104 462 aaKnown RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 KLRC3Q07444 240 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 SLC25A52Q3SY17 297 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 KLHL22Q53GT1 634 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 C5orf47Q569G3 176 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 SLC35D3Q5M8T2 416 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 PIK3CD-AS1Q5SR53 167 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 MANEAQ5SRI9 462 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 BEND3Q5T5X7 828 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF658Q5TYW1 1059 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 EEF1A1P5Q5VTE0 462 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 C9orf135Q5VTT2 229 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 C22orf42Q6IC83 251 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 PNCKQ6P2M8 343 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 RHBDF2Q6PJF5 856 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 PLEKHG7Q6ZR37 379 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 Q6ZSR3 168 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 CCDC50Q8IVM0 306 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 EID3Q8N140 333 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 ELMOD1Q8N336 334 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 INO80EQ8NBZ0 244 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 TTLQ8NG68 377 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 CAPSLQ8WWF8 208 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 IGFBPL1Q8WX77 278 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 ACOT11Q8WXI4 607 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 HSD17B8Q92506 261 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 MRPL24Q96A35 216 aaKnown RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 CCDC127Q96BQ5 260 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 NUS1Q96E22 293 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 JSRP1Q96MG2 331 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 OPALINQ96PE5 141 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 NEDD4LQ96PU5 975 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 CDCA3Q99618 268 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 RACGAP1Q9H0H5 632 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 SLC38A1Q9H2H9 487 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 C1orf198Q9H425 327 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 POPDC2Q9HBU9 364 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 OLFML3Q9NRN5 406 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 TREX1Q9NSU2 369 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 IMP3Q9NV31 184 aaKnown RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 MRPL39Q9NYK5 338 aaKnown RBP4.36□□□□□ -1.71
GABPB1-204ENST00000396464 IL37Q9NZH6 218 aa4.36□□□□□ -1.71
GABPB1-204ENST00000396464 TRBV5-3A0A0A0MS03 114 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 A8MVM7 634 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 MKRN2OSH3BPM6 223 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 M0R3G1 203 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CCSO14618 274 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF195O14628 629 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 TOX3O15405 576 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 B4GALT5O43286 388 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms