RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PCDHGB4Q9UN71 923 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 GPC6Q9Y625 555 aaPredicted RBP16.34■□□□□ 0.21
FXN-203ENST00000396366 NIPBLQ6KC79 2804 aaeCLIP16.33■□□□□ 0.216e-7■■■□□ 15
FXN-203ENST00000396366 PRR14LQ5THK1 2151 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 UQCRHLA0A096LP55 91 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 DUXAA6NLW8 204 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 SDHDO14521 159 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 BCAS1O75363 584 aaPredicted RBP16.33■□□□□ 0.2
FXN-203ENST00000396366 STX11O75558 287 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 UBL4AP11441 157 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 UQCRC2P22695 453 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 LOXP28300 417 aaPredicted RBP16.33■□□□□ 0.2
FXN-203ENST00000396366 ELK4P28324 431 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 ADH6P28332 368 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 IL12AP29459 219 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 AGTR1P30556 359 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 CCR4P51679 360 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 SUMO3P55854 103 aaPredicted RBP16.33■□□□□ 0.2
FXN-203ENST00000396366 PPP2R2AP63151 447 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 SKP2Q13309 424 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 CASP8Q14790 479 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 ZNF239Q16600 458 aaKnown RBP16.33■□□□□ 0.2
FXN-203ENST00000396366 FAM174BQ3ZCQ3 159 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 HEPHL1Q6MZM0 1159 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 C16orf62Q7Z3J2 963 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 NUFIP2Q7Z417 695 aaKnown RBP16.33■□□□□ 0.2
FXN-203ENST00000396366 MIPOL1Q8TD10 442 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 TESCQ96BS2 214 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 ZG16BQ96DA0 208 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 QRSL1Q9H0R6 528 aaKnown RBP16.33■□□□□ 0.2
FXN-203ENST00000396366 WDR55Q9H6Y2 383 aaPredicted RBP16.33■□□□□ 0.2
FXN-203ENST00000396366 COQ10BQ9H8M1 238 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 GLRX2Q9NS18 164 aa16.33■□□□□ 0.2
FXN-203ENST00000396366 IGHV3-15A0A0B4J1V0 119 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 GOLGA8QA0A0J9YX86 632 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 A0A1W2PNR3 127 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 TMEM120BA0PK00 339 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 PRAMEF27A3QJZ7 478 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 GOLGA8OA6NCC3 632 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 GOLGA8NF8WBI6 632 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 EIF4E2O60573 245 aaKnown RBP16.32■□□□□ 0.2
FXN-203ENST00000396366 SNUPNO95149 360 aaKnown RBP16.32■□□□□ 0.2
FXN-203ENST00000396366 ENPP1P22413 925 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 FUT5Q11128 374 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 CBFBQ13951 182 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 ANXA8L1Q5VT79 327 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 SAXO2Q658L1 398 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 TYW3Q6IPR3 259 aaKnown RBP16.32■□□□□ 0.2
FXN-203ENST00000396366 CXorf67Q86X51 503 aaPredicted RBP16.32■□□□□ 0.2
FXN-203ENST00000396366 KRTAP1-3Q8IUG1 177 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 TUSC5Q8IXB3 177 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 TOR1AIP2Q8NFQ8 470 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 RNF128Q8TEB7 428 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 MRGPRX4Q96LA9 322 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 ZNF350Q9GZX5 532 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 LAT2Q9GZY6 243 aa16.32■□□□□ 0.2
FXN-203ENST00000396366 GSX1Q9H4S2 264 aaPredicted RBP16.32■□□□□ 0.2
FXN-203ENST00000396366 MARCOQ9UEW3 520 aaPredicted RBP16.32■□□□□ 0.2
FXN-203ENST00000396366 FREM1Q5H8C1 2179 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 CSTAP01040 98 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 UBTFL6P0CB48 400 aaPredicted RBP16.31■□□□□ 0.2
FXN-203ENST00000396366 KITP10721 976 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 EPHA3P29320 983 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 S100A3P33764 101 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 TSC22D1Q15714 1073 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 TIGD2Q4W5G0 525 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 SLC25A53Q5H9E4 307 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 OGFOD2Q6N063 350 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 FCRLAQ7L513 359 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 VPS37AQ8NEZ2 397 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 ZFP90Q8TF47 636 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 CPNE4Q96A23 557 aaPredicted RBP16.31■□□□□ 0.2
FXN-203ENST00000396366 ROPN1LQ96C74 230 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 SLC35A5Q9BS91 424 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 INPP5KQ9BT40 448 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 UBTD1Q9HAC8 227 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 DLL4Q9NR61 685 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 EXD2Q9NVH0 621 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 AIG1Q9NVV5 245 aa16.31■□□□□ 0.2
FXN-203ENST00000396366 E9PBE3 544 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 ETV2O00321 342 aaPredicted RBP16.3■□□□□ 0.2
FXN-203ENST00000396366 KLF4O43474 513 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 DNAJA2O60884 412 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 SNNO75324 88 aaPredicted RBP16.3■□□□□ 0.2
FXN-203ENST00000396366 H6PDO95479 791 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 AK1P00568 194 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 GSNP06396 782 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 HOXC12P31275 282 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 CDKN2CP42773 168 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 CLNS1AP54105 237 aaKnown RBP16.3■□□□□ 0.2
FXN-203ENST00000396366 SESN3P58005 492 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 GTF2IRD2BQ6EKJ0 949 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 BEND4Q6ZU67 534 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 CROCCP2Q86T23 111 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 GTF2IRD2Q86UP8 949 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 ZNF775Q96BV0 537 aaPredicted RBP16.3■□□□□ 0.2
FXN-203ENST00000396366 NEURL3Q96EH8 262 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 REXO5Q96IC2 774 aaKnown RBP16.3■□□□□ 0.2
FXN-203ENST00000396366 CCDC115Q96NT0 180 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms