RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 ITPKBP27987 946 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 DAPP51397 102 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 PPP2R2BQ00005 443 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 OC90Q02509 493 aaPredicted RBP21.22■□□□□ 0.99
CNN3-202ENST00000394202 C17orf67Q0P5P2 114 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 ST3GAL3Q11203 375 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 SLC22A10Q63ZE4 541 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 SPINK14Q6IE38 97 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 GIPC3Q8TF64 312 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 NRBF2Q96F24 287 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 ZNF570Q96NI8 536 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 OSBPL10Q9BXB5 764 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 CXorf56Q9H5V9 222 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 TMEM27Q9HBJ8 222 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 WIF1Q9Y5W5 379 aa21.22■□□□□ 0.99
CNN3-202ENST00000394202 A0A087WUU8 490 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 WDPCPO95876 746 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 EIF2S3P41091 472 aaKnown RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 CYB561P49447 251 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 CMPK2Q5EBM0 449 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 DCST1Q5T197 706 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 ZNF770Q6IQ21 691 aaPredicted RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 SPACA3Q8IXA5 215 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 DND1Q8IYX4 353 aaKnown RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 OR5W2Q8NH69 310 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 RNF217Q8TC41 542 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 TMEM255BQ8WV15 326 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 GATA6Q92908 595 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 NTNG2Q96CW9 530 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 SGCZQ96LD1 299 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 FEVQ99581 238 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 OSBPL11Q9BXB4 747 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 TRIM2Q9C040 744 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 CCDC86Q9H6F5 360 aaKnown RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 ZNF552Q9H707 407 aaPredicted RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 SH3PXD2BA1X283 911 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 P2RX1P51575 399 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 ARHGDIAP52565 204 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 SMIM11AP58511 58 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 TUBA3CQ13748 450 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 DAG1Q14118 895 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 TRAM2Q15035 370 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 TUBA3EQ6PEY2 450 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 ZNF613Q6PF04 617 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 RTL4Q6ZR62 310 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 MEX3DQ86XN8 651 aaKnown RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 WDSUB1Q8N9V3 476 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 CATSPER1Q8NEC5 780 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 OR10G2Q8NGC3 310 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 B4GALNT2Q8NHY0 566 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 SDCCAG3Q96C92 435 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 SIGLEC12Q96PQ1 595 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 SECISBP2Q96T21 854 aaKnown RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 VCX3BQ9H321 246 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 TMEFF2Q9UIK5 374 aaPredicted RBP21.21■□□□□ 0.99
CNN3-202ENST00000394202 KCNMB2Q9Y691 235 aa21.21■□□□□ 0.99
CNN3-202ENST00000394202 A0A0G2JMM0 328 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 A0A1W2PPB8 328 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 A0A1W2PRS3 328 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 KIR3DP1A8MWS1 328 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 NEURL1O76050 574 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 NUDT14O95848 222 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 AGAP7PQ5VUJ5 663 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 MISPQ8IVT2 679 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 APLFQ8IW19 511 aaPredicted RBP21.2■□□□□ 0.98
CNN3-202ENST00000394202 FDCSPQ8NFU4 85 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 GPR119Q8TDV5 335 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 AGAP4Q96P64 663 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 ANGPTL4Q9BY76 406 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 GABARAPL1Q9H0R8 117 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 LRFN1Q9P244 771 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 DKK4Q9UBT3 224 aa21.2■□□□□ 0.98
CNN3-202ENST00000394202 ANKRD11Q6UB99 2663 aaPredicted RBP21.19■□□□□ 0.98
CNN3-202ENST00000394202 CPAMD8Q8IZJ3 1885 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 CDC40O60508 579 aaKnown RBP eCLIP21.19■□□□□ 0.98
CNN3-202ENST00000394202 MITFO75030 526 aaPredicted RBP21.19■□□□□ 0.98
CNN3-202ENST00000394202 CCNB2O95067 398 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 ENDOUP21128 410 aaKnown RBP21.19■□□□□ 0.98
CNN3-202ENST00000394202 ALDH3A2P51648 485 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 TMEM81Q6P7N7 255 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 NR4A3Q92570 626 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 C3orf49Q96BT1 292 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 FRMD6Q96NE9 622 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 NPAS1Q99742 590 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 POLR2J2Q9GZM3 115 aaKnown RBP21.19■□□□□ 0.98
CNN3-202ENST00000394202 POLR2J3Q9H1A7 115 aaKnown RBP21.19■□□□□ 0.98
CNN3-202ENST00000394202 PPP4R1LQ9P1A2 415 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 FBXL2Q9UKC9 423 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 TMCC3Q9ULS5 477 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 CHD8Q9HCK8 2581 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 GNB5O14775 395 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 GASTP01350 101 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 POU2F1P14859 743 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 COPZ1P61923 177 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 SNTA1Q13424 505 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 TAF11Q15544 211 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 ALG10BQ5I7T1 473 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 FAHD1Q6P587 224 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 ARSKQ6UWY0 536 aa21.19■□□□□ 0.98
CNN3-202ENST00000394202 ISLR2Q6UXK2 745 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms