RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CLHC1Q8NHS4 586 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 PHOSPHO1Q8TCT1 267 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 GPR119Q8TDV5 335 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 ACMSDQ8TDX5 336 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 JADE3Q92613 823 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 ADAD1Q96M93 576 aaKnown RBP13.57□□□□□ -0.24
CHMP3-202ENST00000393773 TSSK3Q96PN8 268 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 STACQ99469 402 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 C1orf109Q9NX04 203 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 GIN1Q9NXP7 522 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 CARD8Q9Y2G2 431 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 E7EQL1 145 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 AKAP10O43572 662 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 CYTIPO60759 359 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 PGM3O95394 542 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 H6PDO95479 791 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 NUDT14O95848 222 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 HMGN2P05204 90 aaKnown RBP13.56□□□□□ -0.24
CHMP3-202ENST00000393773 UROSP10746 265 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 NAA20P61599 178 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 LASP1Q14847 261 aaKnown RBP13.56□□□□□ -0.24
CHMP3-202ENST00000393773 SLC25A53Q5H9E4 307 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 ABLIM2Q6H8Q1 611 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 CLEC2AQ6UVW9 174 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 Q6ZSR9 355 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF525Q8N782 197 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 NOA1Q8NC60 698 aaKnown RBP13.56□□□□□ -0.24
CHMP3-202ENST00000393773 ATP6V1C2Q8NEY4 427 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 IFT81Q8WYA0 676 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF75CPQ92670 426 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-202ENST00000393773 HTRA1Q92743 480 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 CCDC126Q96EE4 140 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 MRGPRX4Q96LA9 322 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 IQCGQ9H095 443 aaKnown RBP13.56□□□□□ -0.24
CHMP3-202ENST00000393773 ANKZF1Q9H8Y5 726 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 CBLN4Q9NTU7 201 aa13.56□□□□□ -0.24
CHMP3-202ENST00000393773 ZCCHC3Q9NUD5 404 aaKnown RBP13.56□□□□□ -0.24
CHMP3-202ENST00000393773 OR5H1A6NKK0 313 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF724A8MTY0 619 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 ESPNB1AK53 854 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 NPIPB9F8W1W9 429 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 H7C417 338 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 CRCPO75575 148 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 PROCP04070 461 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 IGHV4-31P0DP07 118 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 MYL2P10916 166 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 PYGBP11216 843 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 SLC25A16P16260 332 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 GGT1P19440 569 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 SLC7A1P30825 629 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 TTKP33981 857 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 DSCR9P59020 149 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 RPL38P63173 70 aaKnown RBP13.55□□□□□ -0.24
CHMP3-202ENST00000393773 RASGEF1BQ0VAM2 473 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 CDC73Q6P1J9 531 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 C3orf33Q6P1S2 294 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 RNF165Q6ZSG1 346 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 SSX8Q7RTT4 187 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 P2RY8Q86VZ1 359 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF433Q8N7K0 673 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF527Q8NB42 609 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 MUCL1Q96DR8 90 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 DHRS9Q9BPW9 319 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 PIGUQ9H490 435 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 SH3BP4Q9P0V3 963 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 LPAR3Q9UBY5 353 aa13.55□□□□□ -0.24
CHMP3-202ENST00000393773 TENM1Q9UKZ4 2725 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 DNAJB13P59910 316 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 MLC1Q15049 377 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 QPRTQ15274 297 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 RFTN2Q52LD8 501 aaPredicted RBP13.54□□□□□ -0.24
CHMP3-202ENST00000393773 ARL13AQ5H913 290 aaPredicted RBP13.54□□□□□ -0.24
CHMP3-202ENST00000393773 DCST2Q5T1A1 773 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 LRIG3Q6UXM1 1119 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
CHMP3-202ENST00000393773 OR2W6PQ8NHA6 318 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 C10orf105Q8TEF2 133 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 RADILQ96JH8 1075 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 KCNK17Q96T54 332 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 C19orf24Q9BVV8 132 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 BEX2Q9BXY8 128 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 TUBB1Q9H4B7 451 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 BAIAP2L1Q9UHR4 511 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 KCNE3Q9Y6H6 103 aa13.54□□□□□ -0.24
CHMP3-202ENST00000393773 C9JVG2 144 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 SLC28A1O00337 649 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 LSM1O15116 133 aaKnown RBP13.53□□□□□ -0.24
CHMP3-202ENST00000393773 RIPK2O43353 540 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 GLRA3O75311 464 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 RAD51DO75771 328 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 NEFHP12036 1026 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 ATP6V1C1P21283 382 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 IGFBP5P24593 272 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 THBS2P35442 1172 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 TMEM108Q6UXF1 575 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 GALNT5Q7Z7M9 940 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 MUC15Q8N387 334 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 TMCO5AQ8N6Q1 288 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms