RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SEBOXQ9HB31 216 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BEX1Q9HBH7 125 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ADGRL4Q9HBW9 690 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SGK2Q9HBY8 427 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SEMA4GQ9NTN9 838 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ACTR10Q9NZ32 417 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OR6C2Q9NZP2 312 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CNIH4Q9P003 139 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 AKAP7Q9P0M2 348 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ABRACLQ9P1F3 81 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PADI3Q9ULW8 664 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SPATA2Q9UM82 520 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 FOXJ3Q9UPW0 622 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MOKQ9UQ07 419 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BAIAP2Q9UQB8 552 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ERVK-19Q9WJR5 959 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 NTNG1Q9Y2I2 539 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MRPS7Q9Y2R9 242 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SLC45A1Q9Y2W3 748 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BACE2Q9Y5Z0 518 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ADAMTS9Q9P2N4 1935 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 NCOA6Q14686 2063 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 KIAA0100Q14667 2235 aaKnown RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ARPC4-TTLL3A0A0A6YYG9 625 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 CXorf51AA0A1B0GTR3 108 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ZC3H12DA2A288 527 aaKnown RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 GSAPA4D1B5 854 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 CDHR4A6H8M9 788 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF840PA6NDX5 716 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 NAP1L6A6NFF2 107 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 OR6C75A6NL08 312 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PRR32B1ATL7 298 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 C4orf51C9J302 202 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 GABARAPH6UMI1 98 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PYCARD-AS1I3L0S3 204 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SULT2B1O00204 365 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 GPR31O00270 319 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 MAN2B1O00754 1011 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 CDC42EP2O14613 210 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 KIAA0355O15063 1070 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ADAM12O43184 909 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SPINT1O43278 529 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 TSPAN6O43657 245 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 TMPRSS11DO60235 418 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PRAMEF2O60811 474 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SDC3O75056 442 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ITGA10O75578 1167 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 RP2O75695 350 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 EIF3GO75821 320 aaKnown RBP eCLIP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ATG12O94817 140 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PPP1R3DO95685 299 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 LATS1O95835 1130 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 APOC1P02654 83 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 GBAP04062 536 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 IFNA4P05014 189 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ATP1B1P05026 303 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 CTSHP09668 335 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SMIM6P0DI80 62 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 C1GALT1C1LP0DN25 315 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ALPPL2P10696 532 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF35P13682 527 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ANXA7P20073 488 aaKnown RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 RPS4Y1P22090 263 aaKnown RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 NFYAP23511 347 aaPredicted RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ITGB8P26012 769 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 CFPP27918 469 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 CORO1AP31146 461 aaKnown RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SOAT1P35610 550 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 STAT5AP42229 794 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SLC11A2P49281 568 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PRLHRP49683 370 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 P2RX1P51575 399 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF136P52737 540 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PNLIPRP2P54317 469 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 DLX5P56178 289 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 NRG3P56975 720 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 RAB14P61106 215 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PPIAP62937 165 aaKnown RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 PRR5P85299 388 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 FOXK2Q01167 660 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SCRN3Q0VDG4 424 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 TWF1Q12792 350 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF177Q13360 481 aaPredicted RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 HABP2Q14520 560 aaPredicted RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 COL19A1Q14993 1142 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 TRAM2Q15035 370 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 CDK5R1Q15078 307 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 TRAM1Q15629 374 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 KCNA10Q16322 511 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 RPE65Q16518 533 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 SYPL1Q16563 259 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 DECR1Q16698 335 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 MST1LQ2TV78 715 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 UAP1L1Q3KQV9 507 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 RNASE12Q5GAN4 147 aaKnown RBP3.19□□□□□ -1.9
TRAV39-201ENST00000390466 UBE2NLQ5JXB2 153 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 FAM74A1Q5RGS3 127 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 MPP7Q5T2T1 576 aa3.19□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF684Q5T5D7 378 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms