RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 PIKFYVEQ9Y2I7 2098 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 H7C1Q1 480 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 AP4M1O00189 453 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 SYT5O00445 386 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 ELAVL4P26378 380 aaKnown RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 GABRR2P28476 465 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 HOXC13P31276 330 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 THBS2P35442 1172 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 ZNF140P52738 457 aaPredicted RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 PNLIPRP2P54317 469 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 SMAD4Q13485 552 aaKnown RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 PIN1Q13526 163 aaPredicted RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 TRAM1Q15629 374 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 GLT8D1Q68CQ7 371 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 ZNF770Q6IQ21 691 aaPredicted RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 ARRDC2Q8TBH0 407 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 HIST1H2BAQ96A08 127 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 KCTD12Q96CX2 325 aaKnown RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 LCORQ96JN0 433 aaPredicted RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 POLR1EQ9GZS1 481 aaKnown RBP14.02□□□□□ -0.17
VLDLR-202ENST00000382099 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 IL20RAQ9UHF4 553 aa14.02□□□□□ -0.17
VLDLR-202ENST00000382099 IRGMA1A4Y4 181 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 PYCARD-AS1I3L0S3 204 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 TNFRSF10BO14763 440 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 SPAM1P38567 509 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 ADH7P40394 386 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 RAB5CP51148 216 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 HMGA2P52926 109 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 SLC16A1P53985 500 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 F2RL1P55085 397 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 ACVR1Q04771 509 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 PDZD11Q5EBL8 140 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 IQCHQ86VS3 1027 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 DNAAF1Q8NEP3 725 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 NUBPLQ8TB37 319 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 KCTD13Q8WZ19 329 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 ORAI1Q96D31 301 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 TEFMQ96QE5 360 aaKnown RBP14.01□□□□□ -0.17
VLDLR-202ENST00000382099 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.01□□□□□ -0.17
VLDLR-202ENST00000382099 DSPPQ9NZW4 1301 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 ADH1AP07327 375 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 CERS1P27544 350 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 CCND3P30281 292 aaPredicted RBP14.01□□□□□ -0.17
VLDLR-202ENST00000382099 ZNF234Q14588 700 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 SLC9A5Q14940 896 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 EOGTQ5NDL2 527 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 KRT77Q7Z794 578 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 HMGN2P46Q86SG4 172 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 CPXM2Q8N436 756 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 OR2AK2Q8NG84 335 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 HRH4Q9H3N8 390 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 ANGPT4Q9Y264 503 aa14.01□□□□□ -0.17
VLDLR-202ENST00000382099 MYBPHLA2RUH7 354 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SNRNP70P08621 437 aaKnown RBP14□□□□□ -0.17
VLDLR-202ENST00000382099 DDTP30046 118 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 DCTDP32321 178 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 LIMS1P48059 325 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SLC6A11P48066 632 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 TCEAL6Q6IPX3 200 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 TAF8Q7Z7C8 310 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 BEST3Q8N1M1 668 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 BBS10Q8TAM1 723 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SMAP2Q8WU79 429 aaPredicted RBP14□□□□□ -0.17
VLDLR-202ENST00000382099 MVB12BQ9H7P6 319 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 TMEM30AQ9NV96 361 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 UQCC1Q9NVA1 299 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 NLE1Q9NVX2 485 aaPredicted RBP14□□□□□ -0.17
VLDLR-202ENST00000382099 ASB6Q9NWX5 421 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 ZSWIM8A7E2V4 1837 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SMIM28A0A1B0GU29 152 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 TSTD3H0UI37 97 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 C6orf47O95873 294 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 GBAP04062 536 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 GKN3PP0CG01 181 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 HTR5AP47898 357 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 BPIFB3P59826 476 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 HTRA4P83105 476 aaPredicted RBP14□□□□□ -0.17
VLDLR-202ENST00000382099 MTAPQ13126 283 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 RSU1Q15404 277 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 RPE65Q16518 533 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SMIM4Q8WVI0 70 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 ECHDC3Q96DC8 303 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 FGF20Q9NP95 211 aaPredicted RBP14□□□□□ -0.17
VLDLR-202ENST00000382099 RBPJLQ9UBG7 517 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 C5orf42Q9H799 3197 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 PLXNA1Q9UIW2 1896 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 MEIS3P2A8K0S8 358 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 MED6O75586 246 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 INHAP05111 366 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 PDHA2P29803 388 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 AVPR2P30518 371 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SMARCD3Q6STE5 483 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 OR1J4Q8NGS1 313 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SLC7A13Q8TCU3 470 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 DTD1Q8TEA8 209 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 GAL3ST3Q96A11 431 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 LAT2Q9GZY6 243 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 SLITRK2Q9H156 845 aa14□□□□□ -0.17
VLDLR-202ENST00000382099 AK6Q9Y3D8 172 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms