RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ZNF155Q12901 538 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-201ENST00000380829 DUSP8Q13202 625 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
CLCN4-201ENST00000380829 TRAM2Q15035 370 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 C12orf73Q69YU5 71 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 FAM122CQ6P4D5 195 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 FAM131AQ6UXB0 335 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 CASP12Q6UXS9 341 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 PRICKLE2Q7Z3G6 844 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 CDH24Q86UP0 819 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 GJD3Q8N144 294 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 CTHRC1Q96CG8 243 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 ARSGQ96EG1 525 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 SPACA7Q96KW9 195 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 SNTG1Q9NSN8 517 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 MCUBQ9NWR8 336 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 TVP23BQ9NYZ1 205 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 KCNE5Q9UJ90 142 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 PCDH15Q96QU1 1955 aa13.21□□□□□ -0.29
CLCN4-201ENST00000380829 HRKO00198 91 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 STX11O75558 287 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 THY1P04216 161 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 SLC35E2P0CK97 266 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 BTG2P78543 158 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 MXD1Q05195 221 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 DMWDQ09019 674 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 ST3GAL3Q11203 375 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 ASAH1Q13510 395 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 KCNAB1Q14722 419 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 EXOSC6Q5RKV6 272 aaKnown RBP13.21□□□□□ -0.3
CLCN4-201ENST00000380829 OR8H3Q8N146 312 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF619Q8N2I2 560 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 TCEANCQ8N8B7 351 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 ENKURQ8TC29 256 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 FAM46AQ96IP4 442 aaKnown RBP13.21□□□□□ -0.3
CLCN4-201ENST00000380829 GFM1Q96RP9 751 aaKnown RBP13.21□□□□□ -0.3
CLCN4-201ENST00000380829 NELL2Q99435 816 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 PCED1AQ9H1Q7 454 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 UCK1Q9HA47 277 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 DUSP22Q9NRW4 184 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.3
CLCN4-201ENST00000380829 HYKKA2RU49 373 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 RHPN2P1A8MT19 583 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 GKN3PP0CG01 181 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 RNH1P13489 461 aaKnown RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 PRG2P13727 222 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 EVI2BP34910 448 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 EEF1A1P68104 462 aaKnown RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 PSPHP78330 225 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 DBPQ10586 325 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 STX4Q12846 297 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 MAP4K2Q12851 820 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 GINS1Q14691 196 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 QPRTQ15274 297 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 SSX1Q16384 188 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 C14orf28Q4W4Y0 310 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 SLC35F1Q5T1Q4 408 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 GDF7Q7Z4P5 450 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 ZAR1Q86SH2 424 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 ATCAYQ86WG3 371 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 C17orf82Q86X59 251 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 KIF18BQ86Y91 864 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 LIX1LQ8IVB5 337 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 LINC00471Q8N535 108 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 MMABQ96EY8 250 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 TM9SF2Q99805 663 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 ASPNQ9BXN1 380 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 RNF215Q9Y6U7 377 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 SMIM30A4D0T7 59 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 PIAS2O75928 621 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 MYF5P13349 255 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 ALAS2P22557 587 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 GABRA4P48169 554 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 COX10Q12887 443 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 NDUFA9Q16795 377 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 MRPL2Q5T653 305 aaKnown RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 ACSM5Q6NUN0 579 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 CD300LDQ6UXZ3 194 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 RRM2BQ7LG56 351 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 SLC41A3Q96GZ6 507 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 STACQ99469 402 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 SPRTNQ9H040 489 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 LRIT1Q9P2V4 623 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 KLHL21Q9UJP4 597 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 TMEM184BQ9Y519 407 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-201ENST00000380829 CLCA3PQ9Y6N3 262 aa13.2□□□□□ -0.3
CLCN4-201ENST00000380829 CEP192Q8TEP8 1941 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 A0A075B6Q4 140 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 SH3D21A4FU49 640 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 TLCD2A6NGC4 264 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 PLA2G10O15496 165 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 PRKYO43930 277 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 PIP5K1CO60331 668 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms