RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 OR10Q1Q8NGQ4 319 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 OR52P1PQ8NH57 321 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 FBXO27Q8NI29 283 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 NFKBIDQ8NI38 313 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 UCN2Q96RP3 112 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 SLC39A3Q9BRY0 314 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 RSPO3Q9BXY4 272 aaPredicted RBP18.5■□□□□ 0.55
TRIM13-203ENST00000378183 EXOSC3Q9NQT5 275 aaKnown RBP18.5■□□□□ 0.55
TRIM13-203ENST00000378183 DNAJB12Q9NXW2 375 aaKnown RBP18.5■□□□□ 0.55
TRIM13-203ENST00000378183 CORO2BQ9UQ03 480 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 CHST2Q9Y4C5 530 aa18.5■□□□□ 0.55
TRIM13-203ENST00000378183 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 MBD3L4A6NDZ8 208 aaPredicted RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 MBD3L3A6NE82 208 aaPredicted RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 TMEM247A6NEH6 219 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 MBD3L5A6NJ08 208 aaPredicted RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 BBIP1A8MTZ0 92 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 FXYD1O00168 92 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 MRASO14807 208 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 SEC14L5O43304 696 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 CCDC22O60826 627 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 PGM3O95394 542 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 OPN1LWP04000 364 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 NID1P14543 1247 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 IL7RP16871 459 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 CEACAM8P31997 349 aaPredicted RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 TIMP3P35625 211 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 EIF1P41567 113 aaKnown RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 CDK6Q00534 326 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 ART3Q13508 389 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 GNA13Q14344 377 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 SF3B4Q15427 424 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 TRMT5Q32P41 509 aaKnown RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 MRPL2Q5T653 305 aaKnown RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 PRAMEF8Q5VWM4 474 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 PRAMEF7Q5VXH5 474 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 HIST2H2BCQ6DN03 193 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 ZNF836Q6ZNA1 936 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 LIX1LQ8IVB5 337 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 C9orf106Q8NAJ2 232 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 MBD3L2Q8NHZ7 208 aaPredicted RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 SMPDL3BQ92485 455 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 NSRP1Q9H0G5 558 aaKnown RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 MYLK2Q9H1R3 596 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 TMEM38AQ9H6F2 299 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 COQ3Q9NZJ6 369 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 CLCF1Q9UBD9 225 aa18.49■□□□□ 0.55
TRIM13-203ENST00000378183 GPC6Q9Y625 555 aaPredicted RBP18.49■□□□□ 0.55
TRIM13-203ENST00000378183 CLDN14O95500 239 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 COL8A1P27658 744 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 ADH6P28332 368 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 RAC1P63000 192 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 EEF1A1P68104 462 aaKnown RBP18.48■□□□□ 0.55
TRIM13-203ENST00000378183 CYLC2Q14093 348 aaPredicted RBP18.48■□□□□ 0.55
TRIM13-203ENST00000378183 CTU2Q2VPK5 515 aaKnown RBP18.48■□□□□ 0.55
TRIM13-203ENST00000378183 MMEL1Q495T6 779 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 NANOGP8Q6NSW7 305 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 PTOV1Q86YD1 416 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 TREML1Q86YW5 311 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 MEIOBQ8N635 442 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 METTL25Q8N6Q8 603 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 POU5F2Q8N7G0 328 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 LILRB4Q8NHJ6 448 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 BBS10Q8TAM1 723 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 LRRC58Q96CX6 371 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 ADGRG7Q96K78 797 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 MRGPRX4Q96LA9 322 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 KAT8Q9H7Z6 458 aaKnown RBP18.48■□□□□ 0.55
TRIM13-203ENST00000378183 NANOGQ9H9S0 305 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 RLIMQ9NVW2 624 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 ZNF443Q9Y2A4 671 aaPredicted RBP18.48■□□□□ 0.55
TRIM13-203ENST00000378183 HCFC1P51610 2035 aa18.48■□□□□ 0.55
TRIM13-203ENST00000378183 CDHR4A6H8M9 788 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 AP3D1O14617 1153 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 THBS1P07996 1170 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 PGCP20142 388 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 GRNP28799 593 aaKnown RBP18.47■□□□□ 0.55
TRIM13-203ENST00000378183 SHC1P29353 583 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 CHRNB4P30926 498 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 RYKP34925 604 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 GZMMP51124 257 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 DLX5P56178 289 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 SESN3P58005 492 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 LIN52Q52LA3 116 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 REEP3Q6NUK4 255 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 POMZP3Q6PJE2 187 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 NET1Q7Z628 596 aaPredicted RBP18.47■□□□□ 0.55
TRIM13-203ENST00000378183 PIGWQ7Z7B1 504 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 CLIP4Q8N3C7 705 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 CA5BP1Q8WTZ4 195 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 ASB5Q8WWX0 329 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 ZNF845Q96IR2 970 aaPredicted RBP18.47■□□□□ 0.55
TRIM13-203ENST00000378183 UCK2Q9BZX2 261 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 TMEM185BQ9H7F4 350 aa18.47■□□□□ 0.55
TRIM13-203ENST00000378183 A0A0J9YW62 118 aa18.46■□□□□ 0.55
TRIM13-203ENST00000378183 C5orf58C9J3I9 102 aa18.46■□□□□ 0.55
TRIM13-203ENST00000378183 TGM6O95932 706 aa18.46■□□□□ 0.55
TRIM13-203ENST00000378183 NPPAP01160 153 aa18.46■□□□□ 0.55
TRIM13-203ENST00000378183 PABPC4LP0CB38 370 aaKnown RBP18.46■□□□□ 0.55
TRIM13-203ENST00000378183 GP1BBP13224 206 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms