RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 NMNAT1Q9HAN9 279 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-203ENST00000377344 HHATLQ9HCP6 504 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 C6orf203Q9P0P8 240 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-203ENST00000377344 FBXL2Q9UKC9 423 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 A4GNTQ9UNA3 340 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 SAMHD1Q9Y3Z3 626 aaKnown RBP11.8□□□□□ -0.52
CBWD3-203ENST00000377344 PCDHGA9Q9Y5G4 932 aaKnown RBP11.8□□□□□ -0.52
CBWD3-203ENST00000377344 HRH3Q9Y5N1 445 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 EML6Q6ZMW3 1958 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 TCEA1P23193 301 aaKnown RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 MSX1P28360 303 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF41P51814 821 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 IST1P53990 364 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SLC34A1Q06495 639 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TOMM34Q15785 309 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF766Q5HY98 468 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 FGD3Q5JSP0 725 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SULF2Q8IWU5 870 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 GPR119Q8TDV5 335 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 PHF10Q8WUB8 498 aaKnown RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SLC41A3Q96GZ6 507 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 CENPNQ96H22 339 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TMEM41AQ96HV5 264 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 FRMD6Q96NE9 622 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 GNRHR2Q96P88 292 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 FAM173AQ9BQD7 235 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ARHGAP9Q9BRR9 750 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SELENONQ9NZV5 590 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 RIMS3Q9UJD0 308 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SLC7A7Q9UM01 511 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 VDAC3Q9Y277 283 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 KLF13Q9Y2Y9 288 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 A0A1B0GWA3 101 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TRAPPC13A5PLN9 417 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ANKUB1A6NFN9 424 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 B4DXG7 233 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TNFRSF11BO00300 401 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SNPHO15079 494 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 PEX1O43933 1283 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 NME2P1O60361 137 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TRIM3O75382 744 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 OR5F1O95221 314 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 H1F0P07305 194 aaKnown RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF23P17027 643 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 FUT4P22083 530 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 NME2P22392 152 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 RFC3P40938 356 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 CD97P48960 835 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SUMO3P55854 103 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ST3GAL3Q11203 375 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 QPRTQ15274 297 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TOMM20Q15388 145 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TRIP10Q15642 601 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ALG10BQ5I7T1 473 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 COLEC12Q5KU26 742 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TIGD3Q6B0B8 471 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 WBP2NLQ6ICG8 309 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF605Q86T29 641 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 LSMEM1Q8N8F7 131 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 KDF1Q8NAX2 398 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TMEM178AQ8NBL3 297 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 OR2M7Q8NG81 312 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 OR2M3Q8NG83 312 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 SNRNP27Q8WVK2 155 aaKnown RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 NR4A3Q92570 626 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ABHD17AQ96GS6 310 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 CRELD1Q96HD1 420 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 POLR2J2Q9GZM3 115 aaKnown RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 POLR2J3Q9H1A7 115 aaKnown RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TUBA8Q9NY65 449 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 VNN3Q9NY84 501 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 TAS2R10Q9NYW0 307 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 ACAD8Q9UKU7 415 aa11.79□□□□□ -0.52
CBWD3-203ENST00000377344 BOKQ9UMX3 212 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-203ENST00000377344 IGLV3-32A0A0A0MS00 114 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 PINLYPA6NC86 204 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 SAC3D1A6NKF1 404 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 FAM47E-STBD1D6RA91 191 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 KLRC4-KLRK1H3BQV0 150 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 PRSS23O95084 383 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 ITGB2P05107 769 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 GP1BBP13224 206 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 ELAVL4P26378 380 aaKnown RBP11.78□□□□□ -0.52
CBWD3-203ENST00000377344 ARHGDIAP52565 204 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 SMIM11AP58511 58 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 LAPTM4AQ15012 233 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF613Q6PF04 617 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 POMZP3Q6PJE2 187 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 ARSKQ6UWY0 536 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 GDF7Q7Z4P5 450 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 OFCC1Q8IZS5 231 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 NTN4Q9HB63 628 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 DKKL1Q9UK85 242 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 LYVE1Q9Y5Y7 322 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 CHD8Q9HCK8 2581 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 MGAQ8IWI9 3026 aa11.78□□□□□ -0.52
CBWD3-203ENST00000377344 TRAV17A0A0B4J275 112 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 A0A0B4J2E0 115 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms