RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 RNF122Q9H9V4 155 aa19.88■□□□□ 0.77
SRM-201ENST00000376957 FANCFQ9NPI8 374 aa19.88■□□□□ 0.77
SRM-201ENST00000376957 EMC9Q9Y3B6 208 aa19.88■□□□□ 0.77
SRM-201ENST00000376957 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 A0A1W2PNV4 684 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 TUBAL3A6NHL2 446 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 H0YC42 278 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 MSTNO14793 375 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 SMNDC1O75940 238 aaKnown RBP eCLIP19.87■□□□□ 0.77
SRM-201ENST00000376957 PRKCAP17252 672 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 NCF2P19878 526 aaPredicted RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 PPIBP23284 216 aaKnown RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 PSMA4P25789 261 aaKnown RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 FKBP2P26885 142 aaKnown RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 SLC7A1P30825 629 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 RNF144AP50876 292 aaPredicted RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 CRISP3P54108 245 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 TPD52P55327 224 aaPredicted RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 DSTNP60981 165 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 CHRNEQ04844 493 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 SKP2Q13309 424 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 BLOC1S3Q6QNY0 202 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 LUZP2Q86TE4 346 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 FIG4Q92562 907 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 CPNE4Q96A23 557 aaPredicted RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 SPDL1Q96EA4 605 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 ZNF845Q96IR2 970 aaPredicted RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 SLC39A3Q9BRY0 314 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 TMEM185BQ9H7F4 350 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 JKAMPQ9P055 326 aa19.87■□□□□ 0.77
SRM-201ENST00000376957 SPIN1Q9Y657 262 aaPredicted RBP19.87■□□□□ 0.77
SRM-201ENST00000376957 NR5A2O00482 541 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 TNFSF11O14788 317 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 DBIP07108 87 aaKnown RBP19.86■□□□□ 0.77
SRM-201ENST00000376957 SFTPDP35247 375 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 CTBP2P56545 445 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 SYPL1Q16563 259 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 ZSWIM7Q19AV6 140 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 NDUFAF6Q330K2 333 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 C3orf33Q6P1S2 294 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 POC1BQ8TC44 478 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 FAM222BQ8WU58 562 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 GTF2H4Q92759 462 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 OSTF1Q92882 214 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 EXOSC3Q9NQT5 275 aaKnown RBP19.86■□□□□ 0.77
SRM-201ENST00000376957 KCNE5Q9UJ90 142 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 PRDM4Q9UKN5 801 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 ZNF232Q9UNY5 417 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 CORO2BQ9UQ03 480 aa19.86■□□□□ 0.77
SRM-201ENST00000376957 KIAA1549Q9HCM3 1950 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 A0A096LPI6 279 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 AGAP5A6NIR3 686 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 CLIC1O00299 241 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 EDF1O60869 148 aaKnown RBP19.85■□□□□ 0.77
SRM-201ENST00000376957 TROVE2P10155 538 aaKnown RBP eCLIP19.85■□□□□ 0.77
SRM-201ENST00000376957 PGM1P36871 562 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 DLX5P56178 289 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 FADDQ13158 208 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 TMEM176BQ3YBM2 270 aaPredicted RBP19.85■□□□□ 0.77
SRM-201ENST00000376957 AGKQ53H12 422 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 SLC25A53Q5H9E4 307 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 COX20Q5RI15 118 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 PLXDC2Q6UX71 529 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 TMEM200AQ86VY9 491 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 ANKFN1Q8N957 763 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 ATP6V1C2Q8NEY4 427 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 WDR60Q8WVS4 1066 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 GMPPAQ96IJ6 420 aaPredicted RBP19.85■□□□□ 0.77
SRM-201ENST00000376957 NPHS2Q9NP85 383 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 NDRG3Q9UGV2 375 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 EDARQ9UNE0 448 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 PROCRQ9UNN8 238 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 PCDHB14Q9Y5E9 798 aa19.85■□□□□ 0.77
SRM-201ENST00000376957 OIP5O43482 229 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 CXCL13O43927 109 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 TNFSF13O75888 250 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 OPN1LWP04000 364 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 CPOXP36551 454 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 APOBEC1P41238 236 aaKnown RBP19.84■□□□□ 0.77
SRM-201ENST00000376957 HTR3AP46098 478 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 SIRPAP78324 504 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 FUT5Q11128 374 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 MERTKQ12866 999 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 LARS2Q15031 903 aaKnown RBP19.84■□□□□ 0.77
SRM-201ENST00000376957 TOMM34Q15785 309 aaPredicted RBP19.84■□□□□ 0.77
SRM-201ENST00000376957 MAPK14Q16539 360 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 METTL21CQ5VZV1 264 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 SLC2A7Q6PXP3 512 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 FAM214BQ7L5A3 538 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 STK32CQ86UX6 486 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 ZNF440Q8IYI8 595 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 SLC25A43Q8WUT9 341 aaPredicted RBP19.84■□□□□ 0.77
SRM-201ENST00000376957 LURAP1Q96LR2 239 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 SLC38A1Q9H2H9 487 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 MED4Q9NPJ6 270 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 ELOVL5Q9NYP7 299 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 DCTN4Q9UJW0 460 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 MED12LQ86YW9 2145 aa19.84■□□□□ 0.77
SRM-201ENST00000376957 NOTCH2Q04721 2471 aa19.83■□□□□ 0.77
SRM-201ENST00000376957 A0A0G2JND7 137 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms