RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ZMYND11Q15326 602 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 ZNF181Q2M3W8 571 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 AGAP6Q5VW22 663 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 MFSD12Q6NUT3 480 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 ZNF836Q6ZNA1 936 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 TSEN54Q7Z6J9 526 aaKnown RBP10.85□□□□□ -0.67
DDR1-227ENST00000376570 SDR16C5Q8N3Y7 309 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 SLC44A3Q8N4M1 653 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 TMEM99Q8N816 258 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 TSEN15Q8WW01 171 aaKnown RBP10.85□□□□□ -0.67
DDR1-227ENST00000376570 TRIM63Q969Q1 353 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 RASD2Q96D21 266 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 MRPL38Q96DV4 380 aaKnown RBP10.85□□□□□ -0.67
DDR1-227ENST00000376570 C4orf36Q96KX1 117 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 PRRC1Q96M27 445 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 AGAP4Q96P64 663 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 GAS2L1Q99501 681 aaPredicted RBP10.85□□□□□ -0.67
DDR1-227ENST00000376570 DOK1Q99704 481 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 PDCD1LG2Q9BQ51 273 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 ENKD1Q9H0I2 346 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 SEC61A2Q9H9S3 476 aa10.85□□□□□ -0.67
DDR1-227ENST00000376570 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 MAS1P04201 325 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 PTHLHP12272 177 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 Q7L0L9 218 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 Q8N402 240 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 MFSD4AQ8N468 514 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 ADAD1Q96M93 576 aaKnown RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 MS4A4EQ96PG1 132 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 ALG8Q9BVK2 526 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 ZNF717Q9BY31 904 aaPredicted RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 ULBP3Q9BZM4 244 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 SLIRPQ9GZT3 109 aaKnown RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 SLC38A1Q9H2H9 487 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 HHATLQ9HCP6 504 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 MKKSQ9NPJ1 570 aaPredicted RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 MRPL39Q9NYK5 338 aaKnown RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 ZNF224Q9NZL3 707 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 KLF15Q9UIH9 416 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 SATB2Q9UPW6 733 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 RPH3AQ9Y2J0 694 aaPredicted RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 LAMA1P25391 3075 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 MEIOCA2RUB1 952 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 CDC42EP2O14613 210 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 SNRNP200O75643 2136 aaKnown RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 CD6P30203 668 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 ARRB1P49407 418 aaPredicted RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 ZNF45Q02386 682 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 GAS6Q14393 721 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 ARHGAP19Q14CB8 494 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 SYT6Q5T7P8 510 aaPredicted RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 SFRP4Q6FHJ7 346 aaPredicted RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 CNIH2Q6PI25 160 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 C11orf88Q6PI97 169 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 CLDN22Q8N7P3 220 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 OR5M1Q8NGP8 315 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 SLC35B4Q969S0 331 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 GAL3ST3Q96A11 431 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 FRMD6Q96NE9 622 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 KIR3DX1Q9H7L2 352 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 MTHFD2LQ9H903 347 aaPredicted RBP10.84□□□□□ -0.67
DDR1-227ENST00000376570 STMN3Q9NZ72 180 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 MUTYHQ9UIF7 546 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 DAPP1Q9UN19 280 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 A4GNTQ9UNA3 340 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 A0A0G2JPF8 293 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 HNRNPCL3B7ZW38 293 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 TEX46H3BTG2 121 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 I3L521 148 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 UBXN7O94888 489 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 HNRNPCL4P0DMR1 293 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 PCMT1P22061 227 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 RAB30Q15771 203 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 FAHD1Q6P587 224 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 ZNF367Q7RTV3 350 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 RDH10Q8IZV5 341 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 YIPF7Q8N8F6 280 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 OR8D4Q8NGM9 314 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 OR8S1Q8NH09 359 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 LILRB4Q8NHJ6 448 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 SNAPC3Q92966 411 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 TEX101Q9BY14 249 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 ZNF639Q9UID6 485 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 CMAHPQ9Y471 501 aa10.84□□□□□ -0.67
DDR1-227ENST00000376570 C4orf47A7E2U8 309 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 MAKP20794 623 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 MAGEA2P43356 314 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 OR10A3P58181 314 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 KANSL1Q7Z3B3 1105 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 ACBD7Q8N6N7 88 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 ZNF676Q8N7Q3 588 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 OSTF1Q92882 214 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 TRMT61AQ96FX7 289 aaKnown RBP10.83□□□□□ -0.68
DDR1-227ENST00000376570 CRELD1Q96HD1 420 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 TIMM29Q9BSF4 260 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 TMEM38AQ9H6F2 299 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 ANKRD10Q9NXR5 420 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 NLRC5Q86WI3 1866 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 IDSB3KWA1 339 aa10.83□□□□□ -0.68
DDR1-227ENST00000376570 AKAP8O43823 692 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms